RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 MSH4O15457 936 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 DEXIO95424 95 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 NLRP5P59047 1200 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 FBXO47Q5MNV8 452 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 TBCKQ8TEA7 893 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 LINC01599Q8WXQ3 324 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-203ENST00000444440 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 AGO3Q9H9G7 860 aaKnown RBP12.35□□□□□ -0.43
SF3A1-203ENST00000444440 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 PFKFB2O60825 505 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 TDP2O95551 362 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
SF3A1-203ENST00000444440 HTRA4P83105 476 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-203ENST00000444440 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-203ENST00000444440 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 GRB10Q13322 594 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 UGCGQ16739 394 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 NECAB1Q8N987 351 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 GDPD5Q8WTR4 605 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 SEPT8Q92599 483 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 RAD9AQ99638 391 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 ZBED2Q9BTP6 218 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 IFIH1Q9BYX4 1025 aaKnown RBP12.34□□□□□ -0.43
SF3A1-203ENST00000444440 ZNF302Q9NR11 478 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 MTUS1Q9ULD2 1270 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 MTCH2Q9Y6C9 303 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 IGSF9BQ9UPX0 1349 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
SF3A1-203ENST00000444440 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 KIF28PB7ZC32 967 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 CPLX1O14810 134 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 BACH1O14867 736 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 ZNF862O60290 1169 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 EFCAB14O75071 495 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 UPP2O95045 317 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 FDPSP14324 419 aaKnown RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 ANAPC15P60006 121 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 ME3Q16798 604 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 EARS2Q5JPH6 523 aaKnown RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 MCTP2Q6DN12 878 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 ZNF746Q6NUN9 644 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 OXER1Q8TDS5 423 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 SLC5A5Q92911 643 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 TOP1MTQ969P6 601 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 UNC45AQ9H3U1 944 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-203ENST00000444440 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
SF3A1-203ENST00000444440 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 SLC37A4O43826 429 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 AMHP03971 560 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-203ENST00000444440 KLRC1P26715 233 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 CD52P31358 61 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-203ENST00000444440 MBOAT7Q96N66 472 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 SUGCTQ9HAC7 445 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 RC3H2Q9HBD1 1191 aaKnown RBP12.32□□□□□ -0.44
SF3A1-203ENST00000444440 TBC1D22BQ9NU19 505 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
SF3A1-203ENST00000444440 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 SMIM35A0A1B0GVV1 85 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 CHMP2AO43633 222 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 HBP1O60381 514 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 PSMD10O75832 226 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 C22orf31O95567 290 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 CYP3A7P24462 503 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 USP11P51784 963 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 ERVK-21P61565 698 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 KRT76Q01546 638 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 INF2Q27J81 1249 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 TMEM266Q2M3C6 531 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 Q4G0T1 1027 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 B3GNT9Q6UX72 402 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 TSHZ1Q6ZSZ6 1077 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms