RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PTPAQ15257 358 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 USP28Q96RU2 1077 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 HSD17B14Q9BPX1 270 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 EIF2AK1Q9BQI3 630 aaKnown RBP18.01■□□□□ 0.47
USP39-205ENST00000442708 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
USP39-205ENST00000442708 TSHZ2Q9NRE2 1034 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 NR2E3Q9Y5X4 410 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 NRCAMQ92823 1304 aa18■□□□□ 0.47
USP39-205ENST00000442708 ARID2Q68CP9 1835 aa18■□□□□ 0.47
USP39-205ENST00000442708 EVPLQ92817 2033 aa18■□□□□ 0.47
USP39-205ENST00000442708 LAD1O00515 517 aa18■□□□□ 0.47
USP39-205ENST00000442708 SLITRK3O94933 977 aa18■□□□□ 0.47
USP39-205ENST00000442708 OATP04181 439 aa18■□□□□ 0.47
USP39-205ENST00000442708 P4HBP07237 508 aaKnown RBP18■□□□□ 0.47
USP39-205ENST00000442708 PSMC5P62195 406 aa18■□□□□ 0.47
USP39-205ENST00000442708 IGBP1P78318 339 aa18■□□□□ 0.47
USP39-205ENST00000442708 CYP4A11Q02928 519 aa18■□□□□ 0.47
USP39-205ENST00000442708 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
USP39-205ENST00000442708 TRIM71Q2Q1W2 868 aaKnown RBP18■□□□□ 0.47
USP39-205ENST00000442708 FOXD4L6Q3SYB3 417 aaPredicted RBP18■□□□□ 0.47
USP39-205ENST00000442708 FOXD4L3Q6VB84 417 aaPredicted RBP18■□□□□ 0.47
USP39-205ENST00000442708 RUFY4Q6ZNE9 571 aa18■□□□□ 0.47
USP39-205ENST00000442708 SERINC5Q86VE9 423 aa18■□□□□ 0.47
USP39-205ENST00000442708 ATP6V0A1Q93050 837 aa18■□□□□ 0.47
USP39-205ENST00000442708 MBLAC1A4D2B0 266 aaPredicted RBP17.99■□□□□ 0.47
USP39-205ENST00000442708 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 ZBTB39O15060 712 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 HBP1O60381 514 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 SPATA31C1P0DKV0 1188 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 PDIA4P13667 645 aaKnown RBP17.99■□□□□ 0.47
USP39-205ENST00000442708 QARSP47897 775 aaKnown RBP17.99■□□□□ 0.47
USP39-205ENST00000442708 GRIN1Q05586 938 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
USP39-205ENST00000442708 CHAMP1Q96JM3 812 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 SH2D3AQ9BRG2 576 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 LXNQ9BS40 222 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
USP39-205ENST00000442708 SCN5AQ14524 2016 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 TANC1Q9C0D5 1861 aa17.99■□□□□ 0.47
USP39-205ENST00000442708 A0A087WWV3 80 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 MED24O75448 989 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 CDC25AP30304 524 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 CYP2C18P33260 490 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 PTK7Q13308 1070 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 PDIA5Q14554 519 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 TMEM266Q2M3C6 531 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 PLA2G4FQ68DD2 849 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 DTHD1Q6ZMT9 781 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 ANO5Q75V66 913 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 TPH2Q8IWU9 490 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 ZNF579Q8NAF0 562 aaKnown RBP17.98■□□□□ 0.47
USP39-205ENST00000442708 WNT8AQ9H1J5 351 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 HIPK3Q9H422 1215 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
USP39-205ENST00000442708 NOD1Q9Y239 953 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 SIP14410 1827 aa17.98■□□□□ 0.47
USP39-205ENST00000442708 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 RRN3P2A6NIE6 340 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 TIMP1P01033 207 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 GNAT1P11488 350 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 KLRC1P26715 233 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 ANP32AP39687 249 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 TARBP2Q15633 366 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 ECM1Q16610 540 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 XKR3Q5GH77 459 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 ZNF484Q5JVG2 852 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 HABP4Q5JVS0 413 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 ARL6IP4Q66PJ3 421 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 MTHFD1LQ6UB35 978 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 CATSPER3Q86XQ3 398 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 C4orf19Q8IY42 314 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 BADQ92934 168 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 FAM167AQ96KS9 214 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 MMTAG2Q9BU76 263 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 NIFKQ9BYG3 293 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 LRWD1Q9UFC0 647 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 TUBE1Q9UJT0 475 aa17.97■□□□□ 0.47
USP39-205ENST00000442708 RBM19Q9Y4C8 960 aaKnown RBP17.97■□□□□ 0.47
USP39-205ENST00000442708 TCHHQ07283 1943 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 COL1A2P08123 1366 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 C22orf31O95567 290 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 RAG1P15918 1043 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
USP39-205ENST00000442708 NASPP49321 788 aaPredicted RBP17.96■□□□□ 0.47
USP39-205ENST00000442708 CCL23P55773 120 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 NPEPPSP55786 919 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 TRAF7Q6Q0C0 670 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 VWCEQ96DN2 955 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 POLR3CQ9BUI4 534 aaPredicted RBP17.96■□□□□ 0.47
USP39-205ENST00000442708 ZSWIM4Q9H7M6 989 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 PRKAG2Q9UGJ0 569 aa17.96■□□□□ 0.47
USP39-205ENST00000442708 SEPT9Q9UHD8 586 aaPredicted RBP17.96■□□□□ 0.47
USP39-205ENST00000442708 FBXO2Q9UK22 296 aaPredicted RBP17.96■□□□□ 0.47
USP39-205ENST00000442708 CEP131Q9UPN4 1083 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms