RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-218ENST00000442625 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
MCF2L-218ENST00000442625 MAST2Q6P0Q8 1798 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 KIF4AO95239 1232 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 MYBP10242 640 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SCP2P22307 547 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SETDB1Q15047 1291 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 CCDC97Q96F63 343 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 TRIM51Q9BSJ1 452 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 RIC8AQ9NPQ8 531 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 AJAP1Q9UKB5 411 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-218ENST00000442625 KIAA1024Q9UPX6 916 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 NOC2LQ9Y3T9 749 aaKnown RBP15.41■□□□□ 0.06
MCF2L-218ENST00000442625 AKR1B1P15121 316 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 EPS15P42566 896 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 SMTNP53814 917 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 GPSM2P81274 684 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
MCF2L-218ENST00000442625 RNF14Q9UBS8 474 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 TMEM59LQ9UK28 342 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 ABCB11O95342 1321 aa15.41■□□□□ 0.06
MCF2L-218ENST00000442625 ESYT2A0FGR8 921 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 POTEB3A0JP26 581 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 A6NNZ2 444 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 POTECB2RU33 542 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 KRIT1O00522 736 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 TRAPPC3O43617 180 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 RAD21O60216 631 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 UFL1O94874 794 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 RHBDL3P58872 404 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 PDIA5Q14554 519 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 TUBB8Q3ZCM7 444 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 HERC4Q5GLZ8 1057 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 POTEBQ6S5H4 581 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 DPP8Q6V1X1 898 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 UHMK1Q8TAS1 419 aaKnown RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 DDX60LQ5H9U9 1706 aaKnown RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 GPR75-ASB3A0A0A6YYF3 556 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 STAT3P40763 770 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 CASP5P51878 434 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 KCNH2Q12809 1159 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 GRAPQ13588 217 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 MYBPC2Q14324 1141 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 KRT71Q3SY84 523 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 YTHDF3Q7Z739 585 aaKnown RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 GRAPLQ8TC17 118 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-218ENST00000442625 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 RPS6KL1Q9Y6S9 549 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 WNK3Q9BYP7 1800 aa15.4■□□□□ 0.06
MCF2L-218ENST00000442625 F8W031 263 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-218ENST00000442625 CHUKO15111 745 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 DHX9Q08211 1270 aaKnown RBP15.39■□□□□ 0.05
MCF2L-218ENST00000442625 DDR1Q08345 913 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 PSMD2Q13200 908 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 EMC10Q5UCC4 262 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 SPATS2Q86XZ4 545 aaKnown RBP15.39■□□□□ 0.05
MCF2L-218ENST00000442625 TRIM59Q8IWR1 403 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 SCFD2Q8WU76 684 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 GANQ9H2C0 597 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 IKZF4Q9H2S9 585 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 JMJD4Q9H9V9 463 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 MTMR4Q9NYA4 1195 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 PCDHA12Q9UN75 941 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 ATXN2Q99700 1313 aaKnown RBP15.39■□□□□ 0.05
MCF2L-218ENST00000442625 NAV1Q8NEY1 1877 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 CNTNAP4Q9C0A0 1308 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 RPS6KA4O75676 772 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 ADAM9Q13443 819 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 ANKRD20A8PQ5CZ79 823 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 C1QTNF12Q5T7M4 302 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 FUKQ8N0W3 1084 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 PROM2Q8N271 834 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
MCF2L-218ENST00000442625 SCFD1Q8WVM8 642 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 PAGR1Q9BTK6 254 aa15.39■□□□□ 0.05
MCF2L-218ENST00000442625 SHBGP04278 402 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP11P51784 963 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 CDR1P51861 262 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 PPP2R2AP63151 447 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 IRF2BP2Q7Z5L9 587 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 N4BP2L2Q92802 583 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-218ENST00000442625 SPAG5Q96R06 1193 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 PNMA2Q9UL42 364 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 TPX2Q9ULW0 747 aaKnown RBP15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L15C9J2P7 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L13C9JLJ4 530 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms