RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ZNF577Q9BSK1 485 aa20.61■□□□□ 0.89
SMPD4-210ENST00000441135 CHD7Q9P2D1 2997 aa20.61■□□□□ 0.89
SMPD4-210ENST00000441135 KIF3AQ9Y496 699 aa20.61■□□□□ 0.89
SMPD4-210ENST00000441135 IGFBP4P22692 258 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 STAT5BP51692 787 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 PPP4R3AQ6IN85 833 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 ZNF746Q6NUN9 644 aaPredicted RBP20.6■□□□□ 0.89
SMPD4-210ENST00000441135 RUFY4Q6ZNE9 571 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 OXER1Q8TDS5 423 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 APBB2Q92870 758 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 C8orf76Q96K31 380 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 RIT2Q99578 217 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 RAD9AQ99638 391 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 TRPC6Q9Y210 931 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 EYSQ5T1H1 3165 aa20.6■□□□□ 0.89
SMPD4-210ENST00000441135 IGKV6D-21A0A0A0MT36 114 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 DTNBO60941 627 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 CCNE2O96020 404 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 INSRRP14616 1297 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 KRT76Q01546 638 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 SAFBQ15424 915 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMPD4-210ENST00000441135 INF2Q27J81 1249 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 MARCH8Q5T0T0 291 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 FAM160B1Q5W0V3 765 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 SMAP1Q8IYB5 467 aaPredicted RBP20.59■□□□□ 0.89
SMPD4-210ENST00000441135 DIS3L2Q8IYB7 885 aaKnown RBP20.59■□□□□ 0.89
SMPD4-210ENST00000441135 USP38Q8NB14 1042 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 FAM184AQ8NB25 1140 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 TCEAL9Q9UHQ7 104 aa20.59■□□□□ 0.89
SMPD4-210ENST00000441135 UNC80Q8N2C7 3258 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 DDX39AO00148 427 aaKnown RBP20.58■□□□□ 0.89
SMPD4-210ENST00000441135 MSH4O15457 936 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 IGBP1P78318 339 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 PLCB4Q15147 1175 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 PIK3AP1Q6ZUJ8 805 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 TMCO2Q7Z6W1 182 aaPredicted RBP20.58■□□□□ 0.89
SMPD4-210ENST00000441135 SLC5A5Q92911 643 aa20.58■□□□□ 0.89
SMPD4-210ENST00000441135 IFIH1Q9BYX4 1025 aaKnown RBP20.58■□□□□ 0.89
SMPD4-210ENST00000441135 CUL9Q8IWT3 2517 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 POTEB3A0JP26 581 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 BACH1O14867 736 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 ARHGEF15O94989 841 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 TDP2O95551 362 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 CHRNA1P02708 482 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 NR5A1Q13285 461 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 MIS18BP1Q6P0N0 1132 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 POTEBQ6S5H4 581 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 ABHD15Q6UXT9 468 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD4-210ENST00000441135 MYOCDQ8IZQ8 938 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 ARNTL2Q8WYA1 636 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 FOXP1Q9H334 677 aaPredicted RBP20.57■□□□□ 0.88
SMPD4-210ENST00000441135 DDX25Q9UHL0 483 aaKnown RBP20.57■□□□□ 0.88
SMPD4-210ENST00000441135 INSL6Q9Y581 213 aa20.57■□□□□ 0.88
SMPD4-210ENST00000441135 LCHNA4D1U4 455 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 BTBD18B2RXH4 712 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 TBX3O15119 743 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 GTPBP6O43824 516 aaPredicted RBP20.56■□□□□ 0.88
SMPD4-210ENST00000441135 POU3F3P20264 500 aaPredicted RBP20.56■□□□□ 0.88
SMPD4-210ENST00000441135 MGAT3Q09327 533 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 LETM2Q2VYF4 491 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 RDM1Q8NG50 284 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 ETNPPLQ8TBG4 499 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 ATP8B4Q8TF62 1192 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 CERS4Q9HA82 394 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
SMPD4-210ENST00000441135 PCDHA2Q9Y5H9 948 aa20.56■□□□□ 0.88
SMPD4-210ENST00000441135 PRUNE2Q8WUY3 3088 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 PTPRSQ13332 1948 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 WDR64B1ANS9 1081 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 PSMD10O75832 226 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 GHRP10912 638 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 MRPS6P82932 125 aaKnown RBP20.55■□□□□ 0.88
SMPD4-210ENST00000441135 EARS2Q5JPH6 523 aaKnown RBP20.55■□□□□ 0.88
SMPD4-210ENST00000441135 IER5Q5VY09 327 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 FAM117BQ6P1L5 589 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 PPM1EQ8WY54 764 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 FAM20AQ96MK3 541 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 TEKT3Q9BXF9 490 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 OSBPL7Q9BZF2 842 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 ZNF302Q9NR11 478 aa20.55■□□□□ 0.88
SMPD4-210ENST00000441135 M0QZ92 97 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 HBP1O60381 514 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 GAS7O60861 476 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 SFNP31947 248 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 JAK3P52333 1124 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 HTRA4P83105 476 aaPredicted RBP20.54■□□□□ 0.88
SMPD4-210ENST00000441135 CUL4AQ13619 759 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 LPIN1Q14693 890 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 LRCH2Q5VUJ6 765 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 PDXDC2PQ6P474 469 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 B3GNT9Q6UX72 402 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 CCDC60Q8IWA6 550 aaPredicted RBP20.54■□□□□ 0.88
SMPD4-210ENST00000441135 FAM49AQ9H0Q0 323 aaPredicted RBP20.54■□□□□ 0.88
SMPD4-210ENST00000441135 PCDHA10Q9Y5I2 948 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 CDY2AQ9Y6F7 541 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 COL1A2P08123 1366 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms