RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
CPSF4-205ENST00000440514 A0A1W2PPC1 479 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 BAG4O95429 457 aaKnown RBP20.31■□□□□ 0.84
CPSF4-205ENST00000440514 IQCF3P0C7M6 154 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 THPOP40225 353 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 SPIRE1Q08AE8 756 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 ZNF618Q5T7W0 954 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 NCAPH2Q6IBW4 605 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 TRAF7Q6Q0C0 670 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 DEFB128Q7Z7B8 93 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 BANK1Q8NDB2 785 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 VWCEQ96DN2 955 aa20.31■□□□□ 0.84
CPSF4-205ENST00000440514 INTS4Q96HW7 963 aaKnown RBP20.31■□□□□ 0.84
CPSF4-205ENST00000440514 SIP14410 1827 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-205ENST00000440514 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-205ENST00000440514 RRN3P2A6NIE6 340 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 HBP1O60381 514 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 CTSHP09668 335 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 TRAPPC10P48553 1259 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 TOB1P50616 345 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-205ENST00000440514 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
CPSF4-205ENST00000440514 MTMR9Q96QG7 549 aa20.3■□□□□ 0.84
CPSF4-205ENST00000440514 ZBTB42B2RXF5 422 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 OATP04181 439 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 TXKP42681 527 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 TMEM240Q5SV17 173 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 PSRC1Q6PGN9 363 aaPredicted RBP20.29■□□□□ 0.84
CPSF4-205ENST00000440514 ZNF365Q70YC5 407 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
CPSF4-205ENST00000440514 FAM167AQ96KS9 214 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 PCDHB6Q9Y5E3 794 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 COL1A2P08123 1366 aa20.29■□□□□ 0.84
CPSF4-205ENST00000440514 RFC2P35250 354 aa20.28■□□□□ 0.84
CPSF4-205ENST00000440514 ORC2Q13416 577 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-205ENST00000440514 MBTPS1Q14703 1052 aa20.28■□□□□ 0.84
CPSF4-205ENST00000440514 GPNMBQ14956 572 aa20.28■□□□□ 0.84
CPSF4-205ENST00000440514 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
CPSF4-205ENST00000440514 FAM49AQ9H0Q0 323 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-205ENST00000440514 TTC12Q9H892 705 aaPredicted RBP20.28■□□□□ 0.84
CPSF4-205ENST00000440514 PCDHA12Q9UN75 941 aa20.28■□□□□ 0.84
CPSF4-205ENST00000440514 TMEM150BA6NC51 233 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 POTEMA6NI47 508 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 OR52Z1P0C646 297 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 ZNF484Q5JVG2 852 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 MTHFD1LQ6UB35 978 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 FERMT3Q86UX7 667 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 DNAJB3Q8WWF6 145 aa20.27■□□□□ 0.84
CPSF4-205ENST00000440514 WRAP73Q9P2S5 460 aaPredicted RBP20.27■□□□□ 0.84
CPSF4-205ENST00000440514 SEPT9Q9UHD8 586 aaPredicted RBP20.27■□□□□ 0.84
CPSF4-205ENST00000440514 RSPH10B2B2RC85 870 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
CPSF4-205ENST00000440514 NBNO60934 754 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 CAND2O75155 1236 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 STBD1O95210 358 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 C22orf31O95567 290 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 RSPH10BP0C881 870 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 PDCP20941 246 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 KLRC1P26715 233 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 PSMC5P62195 406 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 CYP4A11Q02928 519 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 EPHA7Q15375 998 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 OTOP2Q7RTS6 562 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 DYDC2Q96IM9 177 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 LXNQ9BS40 222 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 OSBPL7Q9BZF2 842 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 RGL1Q9NZL6 768 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 PCDHA2Q9Y5H9 948 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 TET1Q8NFU7 2136 aa20.26■□□□□ 0.83
CPSF4-205ENST00000440514 ARID2Q68CP9 1835 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 FGBP02675 491 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 PFKMP08237 780 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 SYT1P21579 422 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 TCTN1Q2MV58 587 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 RPUSD2Q8IZ73 545 aaKnown RBP20.25■□□□□ 0.83
CPSF4-205ENST00000440514 C4orf32Q8N8J7 132 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 SH2D3AQ9BRG2 576 aa20.25■□□□□ 0.83
CPSF4-205ENST00000440514 FTOQ9C0B1 505 aaKnown RBP eCLIP20.25■□□□□ 0.83
CPSF4-205ENST00000440514 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.25■□□□□ 0.83
CPSF4-205ENST00000440514 P4HBP07237 508 aaKnown RBP20.24■□□□□ 0.83
CPSF4-205ENST00000440514 QARSP47897 775 aaKnown RBP20.24■□□□□ 0.83
CPSF4-205ENST00000440514 TMEM62Q0P6H9 643 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 PTGDRQ13258 359 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 CTTNQ14247 550 aaKnown RBP20.24■□□□□ 0.83
CPSF4-205ENST00000440514 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 XKR3Q5GH77 459 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 PLA2G4FQ68DD2 849 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 RSPH3Q86UC2 560 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 EIF2AK1Q9BQI3 630 aaKnown RBP20.24■□□□□ 0.83
CPSF4-205ENST00000440514 NRBP2Q9NSY0 501 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 CXXC1Q9P0U4 656 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-205ENST00000440514 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
CPSF4-205ENST00000440514 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 DDX11L8A8MPP1 907 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 CXCL10P02778 98 aa20.23■□□□□ 0.83
CPSF4-205ENST00000440514 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
CPSF4-205ENST00000440514 TECP42680 631 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms