RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 LONRF2Q1L5Z9 754 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 LDHDQ86WU2 507 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 MMGT1Q8N4V1 131 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 ALS2CR12Q96Q35 445 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 LSM14BQ9BX40 385 aaKnown RBP9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 KIAA1683Q9H0B3 1180 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 DMAC2Q9NW81 257 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 TRIM10Q9UDY6 481 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 SNX12Q9UMY4 172 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 L1RE1Q9UN81 338 aa9.02□□□□□ -0.96
SPIRE1-204ENST00000440472 ASTN1O14525 1302 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 CES2O00748 559 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 TLR2O60603 784 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 RAD17O75943 681 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 CLSTN1O94985 981 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 EPB41P11171 864 aaKnown RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 DPEP1P16444 411 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 HOXA13P31271 388 aaPredicted RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 SNAP25P60880 206 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 TNIP1Q15025 636 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 SLC18A3Q16572 532 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 XRRA1Q6P2D8 792 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 HDXQ7Z353 690 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 PRPF38AQ8NAV1 312 aaKnown RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 TEKT3Q9BXF9 490 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 DEF6Q9H4E7 631 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 VIPAS39Q9H9C1 493 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 PUF60Q9UHX1 559 aaKnown RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 DBR1Q9UK59 544 aaKnown RBP9.02□□□□□ -0.97
SPIRE1-204ENST00000440472 ZNF536O15090 1300 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 LTBP3Q9NS15 1303 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SHTN1A0MZ66 631 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CLRN2A0PK11 232 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 GAS7O60861 476 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CFBP00751 764 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 NR3C1P04150 777 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PPP2R5AQ15172 486 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 TERF2Q15554 542 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 KLHDC7AQ5VTJ3 777 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 NELFCDQ8IXH7 590 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 C12orf56Q8IXR9 622 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 TNS4Q8IZW8 715 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CYP2W1Q8TAV3 490 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 EEF2KMTQ96G04 330 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 FIZ1Q96SL8 496 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 RUSC1Q9BVN2 902 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 TANGO6Q9C0B7 1094 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 ST6GALNAC4Q9H4F1 302 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 INTUQ9ULD6 942 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 NENFQ9UMX5 172 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 HYOU1Q9Y4L1 999 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 UBIAD1Q9Y5Z9 338 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SMCHD1A6NHR9 2005 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 WNT10BO00744 389 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 MAPK13O15264 365 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PMM2O15305 246 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 TGFB1I1O43294 461 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CTNND1O60716 968 aaKnown RBP9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PPP1R37O75864 691 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SASH3O75995 380 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 FAM13AO94988 1023 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PLEKP08567 350 aaPredicted RBP9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 MYBP10242 640 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CASP5P51878 434 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CYP27A1Q02318 531 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CXCL9Q07325 125 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 NAB2Q15742 525 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 MAP9Q49MG5 647 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 GBP6Q6ZN66 633 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 ZNF720Q7Z2F6 126 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SLC17A8Q8NDX2 589 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 RDM1Q8NG50 284 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 SMCR8Q8TEV9 937 aaPredicted RBP9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 CLEC4DQ8WXI8 215 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 DYDC2Q96IM9 177 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 NOX5Q96PH1 765 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PNKPQ96T60 521 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 ZNF277Q9NRM2 450 aaPredicted RBP9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 TBC1D7Q9P0N9 293 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
SPIRE1-204ENST00000440472 BRCA1P38398 1863 aaKnown RBP9□□□□□ -0.97
SPIRE1-204ENST00000440472 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
SPIRE1-204ENST00000440472 P4HBP07237 508 aaKnown RBP9□□□□□ -0.97
SPIRE1-204ENST00000440472 RFX1P22670 979 aa9□□□□□ -0.97
SPIRE1-204ENST00000440472 PSMC2P35998 433 aaKnown RBP9□□□□□ -0.97
SPIRE1-204ENST00000440472 BAG6P46379 1132 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms