RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SAMD11Q96NU1 681 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 C17orf80Q9BSJ5 609 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 AZI2Q9H6S1 392 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 NFASCO94856 1347 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 RRN3P2A6NIE6 340 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 CDKL5O76039 1030 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 UPP2O95045 317 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 GHRP10912 638 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 FDPSP14324 419 aaKnown RBP18.25■□□□□ 0.51
ITGB1-207ENST00000439974 CLK2P49760 499 aaKnown RBP18.25■□□□□ 0.51
ITGB1-207ENST00000439974 NLRP5P59047 1200 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 CEP55Q53EZ4 464 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 NSUN7Q8NE18 718 aaKnown RBP18.25■□□□□ 0.51
ITGB1-207ENST00000439974 CYP2W1Q8TAV3 490 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
ITGB1-207ENST00000439974 UIMC1Q96RL1 719 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 PCYT2Q99447 389 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 ZMYND12Q9H0C1 365 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 C6orf50Q9HD87 102 aa18.25■□□□□ 0.51
ITGB1-207ENST00000439974 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-207ENST00000439974 RPLP2P05387 115 aaKnown RBP18.24■□□□□ 0.51
ITGB1-207ENST00000439974 ARP10275 920 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 SREBF1P36956 1147 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 ACTR2P61160 394 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 IGBP1P78318 339 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 LPIN1Q14693 890 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 MARCH8Q5T0T0 291 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 DNAJB3Q8WWF6 145 aa18.24■□□□□ 0.51
ITGB1-207ENST00000439974 NECAB3Q96P71 396 aaPredicted RBP18.24■□□□□ 0.51
ITGB1-207ENST00000439974 AGO4Q9HCK5 861 aaKnown RBP18.24■□□□□ 0.51
ITGB1-207ENST00000439974 ESYT2A0FGR8 921 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 MEIS1O00470 390 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 INSRRP14616 1297 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 EPC2Q52LR7 807 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 FBXO47Q5MNV8 452 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 PLPPR4Q7Z2D5 763 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 REXO1Q8N1G1 1221 aaKnown RBP18.23■□□□□ 0.51
ITGB1-207ENST00000439974 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
ITGB1-207ENST00000439974 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 CDY2AQ9Y6F7 541 aa18.23■□□□□ 0.51
ITGB1-207ENST00000439974 ZNF76P36508 570 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 STAT5BP51692 787 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 MRPS6P82932 125 aaKnown RBP18.22■□□□□ 0.51
ITGB1-207ENST00000439974 ITGB3BPQ13352 177 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-207ENST00000439974 PLCB4Q15147 1175 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 PTPROQ16827 1216 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 NIPA1Q7RTP0 329 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 NLRC5Q86WI3 1866 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 STK36Q9NRP7 1315 aa18.22■□□□□ 0.51
ITGB1-207ENST00000439974 RALGAPA2Q2PPJ7 1873 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 GNA11P29992 359 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 NPY5RQ15761 445 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 IER5Q5VY09 327 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 TSHZ1Q6ZSZ6 1077 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 TMEM192Q8IY95 271 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 MRPL38Q96DV4 380 aaKnown RBP18.21■□□□□ 0.51
ITGB1-207ENST00000439974 FAM49AQ9H0Q0 323 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-207ENST00000439974 SH3GLB2Q9NR46 395 aa18.21■□□□□ 0.51
ITGB1-207ENST00000439974 TTC3P53804 2025 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 H3BNC9 293 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 M0QZ92 97 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 ST18O60284 1047 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 ATG7O95352 703 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 SLC26A2P50443 739 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 GPM6BQ13491 265 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 PLA2G4DQ86XP0 818 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 UBE2ZQ9H832 354 aaPredicted RBP18.2■□□□□ 0.5
ITGB1-207ENST00000439974 PCDHA4Q9UN74 947 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 PCDHA2Q9Y5H9 948 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 TRPV2Q9Y5S1 764 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 BDP1A6H8Y1 2624 aa18.2■□□□□ 0.5
ITGB1-207ENST00000439974 IGKV6D-21A0A0A0MT36 114 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 POTEB3A0JP26 581 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
ITGB1-207ENST00000439974 ENPP3O14638 875 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 CYP3A4P08684 503 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 POTEBQ6S5H4 581 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 BLIDQ8IZY5 108 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 FIBCD1Q8N539 461 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 TRAPPC12Q8WVT3 735 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 ZSCAN31Q96LW9 406 aaPredicted RBP18.19■□□□□ 0.5
ITGB1-207ENST00000439974 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 ADGRA3Q8IWK6 1321 aa18.19■□□□□ 0.5
ITGB1-207ENST00000439974 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.18■□□□□ 0.5
ITGB1-207ENST00000439974 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 FAM86B1E9PN63 330 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 BACH1O14867 736 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 EDIL3O43854 480 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 CCNE2O96020 404 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 FAM86B2P0C5J1 330 aa18.18■□□□□ 0.5
ITGB1-207ENST00000439974 CD52P31358 61 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms