RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 EDIL3O43854 480 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 NBNO60934 754 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 CTSHP09668 335 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 DNAJB2P25686 324 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
MCF2L-216ENST00000439475 FAM26DQ5JW98 314 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 Q7L0L9 218 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 CCDC60Q8IWA6 550 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-216ENST00000439475 DIS3L2Q8IYB7 885 aaKnown RBP11.81□□□□□ -0.52
MCF2L-216ENST00000439475 DNAJB3Q8WWF6 145 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 APBB2Q92870 758 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 WNT8BQ93098 351 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 LENG9Q96B70 501 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 PBX4Q9BYU1 374 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 SLC28A3Q9HAS3 691 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 GJB4Q9NTQ9 266 aa11.81□□□□□ -0.52
MCF2L-216ENST00000439475 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 SMIM35A0A1B0GVV1 85 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 MAGEB2O15479 319 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 CHMP2AO43633 222 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 DTNBO60941 627 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 PSMD10O75832 226 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 KLRC1P26715 233 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 GPNMBQ14956 572 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 PLEKHG4Q58EX7 1191 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 SLFN12Q8IYM2 578 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 USP38Q8NB14 1042 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 VWCEQ96DN2 955 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
MCF2L-216ENST00000439475 AMHP03971 560 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TMOD1P28289 359 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 FOSBP53539 338 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 NR5A1Q13285 461 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TRMT1LQ7Z2T5 733 aaKnown RBP11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TET1Q8NFU7 2136 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-216ENST00000439475 UNC45AQ9H3U1 944 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TRPV2Q9Y5S1 764 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
MCF2L-216ENST00000439475 TLL1O43897 1013 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 OATP04181 439 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 ATP4AP20648 1035 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 PBX2P40425 430 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 WDR5P61964 334 aaKnown RBP11.78□□□□□ -0.52
MCF2L-216ENST00000439475 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
MCF2L-216ENST00000439475 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
MCF2L-216ENST00000439475 CELF4Q9BZC1 486 aaKnown RBP11.78□□□□□ -0.52
MCF2L-216ENST00000439475 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-216ENST00000439475 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 PCDHA12Q9UN75 941 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 CDY2AQ9Y6F7 541 aa11.78□□□□□ -0.52
MCF2L-216ENST00000439475 SLC37A4O43826 429 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 CHRNA1P02708 482 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 P4HBP07237 508 aaKnown RBP11.77□□□□□ -0.53
MCF2L-216ENST00000439475 RABGGTBP53611 331 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 PSMC5P62195 406 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 MGAT3Q09327 533 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 MBTPS1Q14703 1052 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 EPHA7Q15375 998 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 B3GNT9Q6UX72 402 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 TRAPPC12Q8WVT3 735 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 TNFRSF25Q93038 417 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 GJA10Q969M2 543 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-216ENST00000439475 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-216ENST00000439475 FTHL17Q9BXU8 183 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
MCF2L-216ENST00000439475 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-216ENST00000439475 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.53
MCF2L-216ENST00000439475 EVPLQ92817 2033 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 NEMFO60524 1076 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 GHRP10912 638 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
MCF2L-216ENST00000439475 QARSP47897 775 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms