RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 PDE6BP35913 854 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 ZNF571Q7Z3V5 609 aaPredicted RBP14.81□□□□□ -0.04
PCNX3-202ENST00000439247 RPAINQ86UA6 219 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 UHMK1Q8TAS1 419 aaKnown RBP14.81□□□□□ -0.04
PCNX3-202ENST00000439247 MAGEF1Q9HAY2 307 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 L3MBTL1Q9Y468 752 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 LAD1O00515 517 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 PPP2R5AQ15172 486 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CAVIN4Q5BKX8 364 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 LRIG3Q6UXM1 1119 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 TCP11Q8WWU5 503 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 IQCDQ96DY2 449 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 TMEM47Q9BQJ4 181 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 UBA5Q9GZZ9 404 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 GGA2Q9UJY4 613 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CCDC189A1A4V9 331 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 KIF1CO43896 1103 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 NEBLO76041 1014 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 GKAP1Q5VSY0 366 aaPredicted RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 TMC3Q7Z5M5 1100 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 STAMBPL1Q96FJ0 436 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 SAP30BPQ9UHR5 308 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 TLDC2A0PJX2 215 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 PCP11498 1178 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 SLC9A1P19634 815 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 ELF3P78545 371 aaPredicted RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 LRRC63Q05C16 580 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 DRP2Q13474 957 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 ASIC2Q16515 512 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 DAGLBQ8NCG7 672 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 C1orf131Q8NDD1 294 aaKnown RBP14.8□□□□□ -0.04
PCNX3-202ENST00000439247 SNX29Q8TEQ0 813 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 FAXDC2Q96IV6 333 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 ZMYND12Q9H0C1 365 aa14.8□□□□□ -0.04
PCNX3-202ENST00000439247 EDIL3O43854 480 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 CLTAP09496 248 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 TSPY3P0CV98 308 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 TSPY8P0CW00 308 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 NAA25Q14CX7 972 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 FAM133BQ5BKY9 247 aaKnown RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 LRRC45Q96CN5 670 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 THOC1Q96FV9 657 aaKnown RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 PIGSQ96S52 555 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 GCFC2P16383 781 aaKnown RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 USP11P51784 963 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 COASYQ13057 564 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 CALCRLQ16602 461 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 MYOCDQ8IZQ8 938 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 TSG101Q99816 390 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 SELENOSQ9BQE4 189 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 NOD2Q9HC29 1040 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 NRXN2Q9P2S2 1712 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 KLRG2A4D1S0 409 aaPredicted RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 C5orf60A6NFR6 353 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 F8VZ95 297 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 ATP6V1G2O95670 118 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 EZRP15311 586 aaKnown RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 IFFO1Q0D2I5 559 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 XRCC4Q13426 336 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 CUL1Q13616 776 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 RUFY4Q6ZNE9 571 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 TBC1D1Q86TI0 1168 aaPredicted RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 RAD54LQ92698 747 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 GOPCQ9HD26 462 aa14.79□□□□□ -0.04
PCNX3-202ENST00000439247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 AJAP1Q9UKB5 411 aaPredicted RBP14.79□□□□□ -0.04
PCNX3-202ENST00000439247 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 FGFR1OPO95684 399 aaKnown RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 PPP1R2P41236 205 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 FKBP3Q00688 224 aaKnown RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 BIRC3Q13489 604 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 ZCWPW2Q504Y3 356 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 COBLL1Q53SF7 1204 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 TLDC1Q6P9B6 456 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 LRRC57Q8N9N7 239 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 COA7Q96BR5 231 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 PSMD1Q99460 953 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 ANKIB1Q9P2G1 1089 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 PVALEFA0A1B0GWK0 134 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 PALM3A6NDB9 673 aaPredicted RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 PGRMC1O00264 195 aaKnown RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 ZBTB48P10074 688 aaPredicted RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 CHN1P15882 459 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 CHRNA5P30532 468 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 GBP2P32456 591 aaPredicted RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 GJB7Q6PEY0 223 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 KRT25Q7Z3Z0 450 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 DGKHQ86XP1 1220 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 XPO6Q96QU8 1125 aaKnown RBP14.78□□□□□ -0.04
PCNX3-202ENST00000439247 ZHX3Q9H4I2 956 aa14.78□□□□□ -0.04
PCNX3-202ENST00000439247 MGRN1O60291 552 aa14.77□□□□□ -0.04
PCNX3-202ENST00000439247 ZBTB7AO95365 584 aa14.77□□□□□ -0.04
PCNX3-202ENST00000439247 IFNAR2P48551 515 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms