RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 NECTIN1Q15223 517 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 WWC2Q6AWC2 1192 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 PLPPR4Q7Z2D5 763 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 SGMS1Q86VZ5 419 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 CRIPAKQ8N1N5 446 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 CYP2W1Q8TAV3 490 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 POP1Q99575 1024 aaKnown RBP21.86■■□□□ 1.09
MUC1-211ENST00000438413 UPF3BQ9BZI7 483 aaKnown RBP21.86■■□□□ 1.09
MUC1-211ENST00000438413 PCDHA2Q9Y5H9 948 aa21.86■■□□□ 1.09
MUC1-211ENST00000438413 CNTNAP5Q8WYK1 1306 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 MUC6Q6W4X9 2439 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 STAG3L1P0CL83 205 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 STAT5BP51692 787 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 NAPAP54920 295 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 SMAD4Q13485 552 aaKnown RBP21.85■■□□□ 1.09
MUC1-211ENST00000438413 PAN2Q504Q3 1202 aaKnown RBP21.85■■□□□ 1.09
MUC1-211ENST00000438413 NAALADL2Q58DX5 795 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 SYNE3Q6ZMZ3 975 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 PPP2R3CQ969Q6 453 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 PGBD1Q96JS3 809 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 ESYT1Q9BSJ8 1104 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 CELF4Q9BZC1 486 aaKnown RBP21.85■■□□□ 1.09
MUC1-211ENST00000438413 C5orf42Q9H799 3197 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 PLXNA4Q9HCM2 1894 aa21.85■■□□□ 1.09
MUC1-211ENST00000438413 SMIM35A0A1B0GVV1 85 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 ITGB1P05556 798 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 ARP10275 920 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 SCG2P13521 617 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 DNAJB1P25685 340 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 IRX6P78412 446 aaPredicted RBP21.84■■□□□ 1.09
MUC1-211ENST00000438413 ADAM15Q13444 863 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 TYW1BQ6NUM6 668 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 RIC8AQ9NPQ8 531 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 CD207Q9UJ71 328 aa21.84■■□□□ 1.09
MUC1-211ENST00000438413 KDM3AQ9Y4C1 1321 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 NDUFV1P49821 464 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 KRT76Q01546 638 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 ITGB3BPQ13352 177 aaPredicted RBP21.83■■□□□ 1.09
MUC1-211ENST00000438413 CEP55Q53EZ4 464 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 PPP1R18Q6NYC8 613 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 MTHFD1LQ6UB35 978 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 NME8Q8N427 588 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 KLHL23Q8NBE8 558 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 SPPL3Q8TCT6 385 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 ANO3Q9BYT9 981 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 AGO4Q9HCK5 861 aaKnown RBP21.83■■□□□ 1.09
MUC1-211ENST00000438413 ANO2Q9NQ90 1003 aa21.83■■□□□ 1.09
MUC1-211ENST00000438413 RBM28Q9NW13 759 aaKnown RBP21.83■■□□□ 1.09
MUC1-211ENST00000438413 FOSP01100 380 aaPredicted RBP21.82■■□□□ 1.08
MUC1-211ENST00000438413 GATMP50440 423 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 SLC26A2P50443 739 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 APOA5Q6Q788 366 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 ADGRD2Q7Z7M1 963 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 TEX2Q8IWB9 1127 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 LRFN2Q9ULH4 789 aa21.82■■□□□ 1.08
MUC1-211ENST00000438413 FNDC1Q4ZHG4 1894 aaPredicted RBP21.81■■□□□ 1.08
MUC1-211ENST00000438413 ATG7O95352 703 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 IBSPP21815 317 aaPredicted RBP21.81■■□□□ 1.08
MUC1-211ENST00000438413 ADCY7P51828 1080 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 TMEM266Q2M3C6 531 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 POF1BQ8WVV4 589 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 MSLNLQ96KJ4 702 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 TMX1Q9H3N1 280 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 MUTYHQ9UIF7 546 aa21.81■■□□□ 1.08
MUC1-211ENST00000438413 IGKV6D-21A0A0A0MT36 114 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 DDX39AO00148 427 aaKnown RBP21.8■■□□□ 1.08
MUC1-211ENST00000438413 STXBP3O00186 592 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 MEIS1O00470 390 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 SREBF1P36956 1147 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 NFX1Q12986 1120 aaKnown RBP21.8■■□□□ 1.08
MUC1-211ENST00000438413 RTN1Q16799 776 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 ALYREFQ86V81 257 aaKnown RBP21.8■■□□□ 1.08
MUC1-211ENST00000438413 RNF135Q8IUD6 432 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 EFHBQ8N7U6 833 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 TMEM260Q9NX78 707 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 GINS2Q9Y248 185 aa21.8■■□□□ 1.08
MUC1-211ENST00000438413 EVPLQ92817 2033 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 SMCO2A6NFE2 343 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 hCG_1984214I3L0E3 225 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 BACH1O14867 736 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 HBP1O60381 514 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 CCNE2O96020 404 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 KLRC1P26715 233 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 ZNF76P36508 570 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 NRIP1P48552 1158 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 SARSP49591 514 aaKnown RBP21.79■■□□□ 1.08
MUC1-211ENST00000438413 FUT2Q10981 343 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 AP3B2Q13367 1082 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 HERC4Q5GLZ8 1057 aaPredicted RBP21.79■■□□□ 1.08
MUC1-211ENST00000438413 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 FAM160B1Q5W0V3 765 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 HFE2Q6ZVN8 426 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 ZNF713Q8N859 430 aaPredicted RBP21.79■■□□□ 1.08
MUC1-211ENST00000438413 NEK1Q96PY6 1258 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 PCDHB7Q9Y5E2 793 aa21.79■■□□□ 1.08
MUC1-211ENST00000438413 V9GY48 417 aaPredicted RBP21.79■■□□□ 1.08
MUC1-211ENST00000438413 COL1A2P08123 1366 aa21.78■■□□□ 1.08
MUC1-211ENST00000438413 ZBTB43O43298 467 aa21.78■■□□□ 1.08
MUC1-211ENST00000438413 RPS6KA5O75582 802 aa21.78■■□□□ 1.08
MUC1-211ENST00000438413 EYA4O95677 639 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms