RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ECEL1O95672 775 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 IFNB1P01574 187 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 KRT14P02533 472 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 RASA1P20936 1047 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CARSP49589 748 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PPP2R2AP63151 447 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 LLGL1Q15334 1064 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 AOC3Q16853 763 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 C6orf118Q5T5N4 469 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 SYDE2Q5VT97 1194 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ADGRA1Q86SQ6 560 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ADGRF4Q8IZF3 695 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 BBOF1Q8ND07 529 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 FAM20AQ96MK3 541 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PSMD1Q99460 953 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PCIF1Q9H4Z3 704 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PI4KBQ9UBF8 816 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 NOC2LQ9Y3T9 749 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CAPN6Q9Y6Q1 641 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 MIF4GDA9UHW6 222 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PODXLO00592 558 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 MAP2K7O14733 419 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PPEF1O14829 653 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CHUKO15111 745 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 SART1O43290 800 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 GDF11O95390 407 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 TFRCP02786 760 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 DLATP10515 647 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 MAN1A1P33908 653 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 MXI1P50539 228 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 RASSF2P50749 326 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF131P52739 623 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CORO7P57737 925 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CDK17Q00537 523 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ADCY2Q08462 1091 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CTTNQ14247 550 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 E2F5Q15329 346 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 SGO2Q562F6 1265 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 LRRC31Q6UY01 552 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 LRP10Q7Z4F1 713 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 FRMD5Q7Z6J6 570 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 LMNTD2Q8IXW0 634 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 STMN2Q93045 179 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 TBC1D31Q96DN5 1066 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ZIM3Q96PE6 472 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 TACO1Q9BSH4 297 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 TMEM206Q9H813 350 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 DMGDHQ9UI17 866 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 FBXL5Q9UKA1 691 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 CD2APQ9Y5K6 639 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 MEFVO15553 781 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ABCB7O75027 752 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 HIP1RO75146 1068 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PRLRP16471 622 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 KLRC1P26715 233 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 HOXA13P31271 388 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-205ENST00000438362 NEDD9Q14511 834 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 QRICH1Q2TAL8 776 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 OTUD6AQ7L8S5 288 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 NLRX1Q86UT6 975 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 PIGOQ8TEQ8 1089 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 P3H4Q92791 437 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ACCSQ96QU6 501 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 POLD4Q9HCU8 107 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 AMACRQ9UHK6 382 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 ODF2LQ9ULJ1 636 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 AKAP12Q02952 1782 aa7.24□□□□□ -1.25
CSDE1-205ENST00000438362 FAM205AQ6ZU69 1335 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 SYNGAP1Q96PV0 1343 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 NDC80O14777 642 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DAPK3O43293 454 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 AKR1B1P15121 316 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MDH1P40925 334 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 NSFP46459 744 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 USP11P51784 963 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 PMS1P54277 932 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 PTK2Q05397 1052 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DLGAP5Q15398 846 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 DPH6Q7L8W6 267 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGEF2Q92974 986 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MAK16Q9BXY0 300 aaKnown RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 COA1Q9GZY4 146 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MTMR4Q9NYA4 1195 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MAD2L2Q9UI95 211 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ABCB11O95342 1321 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ESYT2A0FGR8 921 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 KCNQ2O43526 872 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 NEBLO76041 1014 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MMEP08473 750 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 MAPK4P31152 587 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 STAT3P40763 770 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 FXR2P51116 673 aaKnown RBP eCLIP7.23□□□□□ -1.255e-7■□□□□ 10.4
CSDE1-205ENST00000438362 TRPC3Q13507 836 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 SNX1Q13596 522 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 NAB2Q15742 525 aa7.23□□□□□ -1.25
CSDE1-205ENST00000438362 ZKSCAN8Q15776 578 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-205ENST00000438362 TSNAXIP1Q2TAA8 658 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms