RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 CAP2P40123 477 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 MARSP56192 900 aaKnown RBP12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 PPP2R3AQ06190 1150 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 SPIRE1Q08AE8 756 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 ELF2Q15723 593 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 ERCC6LQ2NKX8 1250 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 EDRF1Q3B7T1 1238 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 USH1GQ495M9 461 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 HERC4Q5GLZ8 1057 aaPredicted RBP12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 CATSPER3Q86XQ3 398 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 CHP1Q99653 195 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 SLF1Q9BQI6 1058 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 TUFT1Q9NNX1 390 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 EMILIN3Q9NT22 766 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 SRRDQ9UH36 339 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
ERGIC3-207ENST00000438317 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 IRF6O14896 467 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 MSH4O15457 936 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 KRT86O43790 486 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 MED24O75448 989 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 EYA4O95677 639 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 TUBBP07437 444 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 SPATA31C1P0DKV0 1188 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 CCL5P13501 91 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 H2AFXP16104 143 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 GAP43P17677 238 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 OSBPP22059 807 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 GRK4P32298 578 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 BMS1Q14692 1282 aaKnown RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 NCAPH2Q6IBW4 605 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 SYN2Q92777 582 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 LENG9Q96B70 501 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 NAPGQ99747 312 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 MAP3K20Q9NYL2 800 aaKnown RBP12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 SIK3Q9Y2K2 1263 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 NR2E3Q9Y5X4 410 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 CSADQ9Y600 493 aa12.18□□□□□ -0.46
ERGIC3-207ENST00000438317 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 FAM86B1E9PN63 330 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 OPLAHO14841 1288 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 CETN3O15182 167 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 FAM86B2P0C5J1 330 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 PSMC4P43686 418 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 SNAP25P60880 206 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 GIT2Q14161 759 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 LRRC41Q15345 812 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 SPA17Q15506 151 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 WHAMMP3Q1A5X7 153 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 LRRC55Q6ZSA7 311 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ACRBPQ8NEB7 543 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 NEK11Q8NG66 645 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 GOLGA1Q92805 767 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 ZKSCAN4Q969J2 545 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 TSGA10Q9BZW7 698 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 NHEJ1Q9H9Q4 299 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
ERGIC3-207ENST00000438317 MYH10P35580 1976 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 MYH11P35749 1972 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 PDXKO00764 312 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 FANCGO15287 622 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 CFBP00751 764 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 FDX1P10109 184 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 RPL13P26373 211 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 PPP2R5CQ13362 524 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 ADAM9Q13443 819 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 SNAPC2Q13487 334 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 FRMD5Q7Z6J6 570 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 KIAA1328Q86T90 577 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 SPICE1Q8N0Z3 855 aa12.16□□□□□ -0.46
ERGIC3-207ENST00000438317 SLC35F6Q8N357 371 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms