RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 SLC12A1Q13621 1099 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
PTCH1-209ENST00000437951 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
PTCH1-209ENST00000437951 KRT87PA6NCN2 255 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SLC1A4P43007 532 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 LAMB3Q13751 1172 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 TMEM206Q9H813 350 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ARHGEF37A1IGU5 675 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 PMLP29590 882 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 NUP107P57740 925 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 FANCEQ9HB96 536 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 OLA1Q9NTK5 396 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 PCDHB4Q9Y5E5 795 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 DTNBO60941 627 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SOX6P35712 828 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 C8orf58Q8NAV2 365 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ADA2Q9NZK5 511 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 H0YC42 278 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 M0R3G1 203 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 NDUFA5Q16718 116 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SLC26A7Q8TE54 656 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 HIC2Q96JB3 615 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 PRPF18Q99633 342 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 FAM83GA6ND36 823 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ASAP2O43150 1006 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 DIAPH2O60879 1101 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 LRRC63Q05C16 580 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 RSPH1Q8WYR4 309 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 DDX25Q9UHL0 483 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 MAGEA13PA6NCF6 341 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ORC4O43929 436 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 FRA10AC1Q70Z53 315 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 DNAJC9Q8WXX5 260 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 ZNF408Q9H9D4 720 aa12.33□□□□□ -0.44
PTCH1-209ENST00000437951 SMG5Q9UPR3 1016 aaKnown RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 PRG3Q9Y2Y8 225 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-209ENST00000437951 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 PGM1P36871 562 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 PMS2P54278 862 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 AASDHQ4L235 1098 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 LRIG3Q6UXM1 1119 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SNX19Q92543 992 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ADCY9O60503 1353 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ZMYND10O75800 440 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 EIF2S1P05198 315 aaKnown RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ANKRD36BP1Q96IX9 119 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 KCNK16Q96T55 309 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 EYA2O00167 538 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 TOMM70O94826 608 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 MOCS3O95396 460 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 VCAM1P19320 739 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SLC39A14Q15043 492 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 FAM102BQ5T8I3 360 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 CCDC103Q8IW40 242 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 OLFM1Q99784 485 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 UBAP1Q9NZ09 502 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 PDE5AO76074 875 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 TP53BP2Q13625 1128 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 FOXO3O43524 673 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SURF1Q15526 300 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 RMDN1Q96DB5 314 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 MAGEB5Q9BZ81 275 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 PJA2O43164 708 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ACSL3O95573 720 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 ANP32DO95626 131 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 OCM2P0CE71 109 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SP4Q02446 784 aa12.32□□□□□ -0.44
PTCH1-209ENST00000437951 SYDE1Q6ZW31 735 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms