RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 ZNF174Q15697 407 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 TMEM63BQ5T3F8 832 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 CXCL17Q6UXB2 119 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 SMIM35A0A1B0GVV1 85 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 CLTBP09497 229 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 SMIM10L2AP0DMW4 78 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 SMIM10L2BP0DMW5 78 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
SNHG3-202ENST00000437681 KCNN1Q92952 543 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
SNHG3-202ENST00000437681 PHLPP2Q6ZVD8 1323 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 STBD1O95210 358 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 FOSBP53539 338 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 SERINC5Q86VE9 423 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
SNHG3-202ENST00000437681 GLG1Q92896 1179 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 NACC1Q96RE7 527 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
SNHG3-202ENST00000437681 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 TBX21Q9UL17 535 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 PCBP1Q15365 356 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNHG3-202ENST00000437681 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 ODR4Q5SWX8 454 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
SNHG3-202ENST00000437681 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
SNHG3-202ENST00000437681 EIF2AK1Q9BQI3 630 aaKnown RBP12.86□□□□□ -0.35
SNHG3-202ENST00000437681 CUTAO60888 179 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
SNHG3-202ENST00000437681 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 LINC00301Q8NCQ3 95 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 GABBR1Q9UBS5 961 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 BACH1O14867 736 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 TXKP42681 527 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 MLLT1Q03111 559 aaPredicted RBP12.85□□□□□ -0.35
SNHG3-202ENST00000437681 PPFIA1Q13136 1202 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SNHG3-202ENST00000437681 USP38Q8NB14 1042 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
SNHG3-202ENST00000437681 A0A1W2PPC1 479 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 WNT7AO00755 349 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 SLITRK3O94933 977 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 BMP8BP34820 402 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 KRT85P78386 507 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 GRIK4Q16099 956 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 TCP11Q8WWU5 503 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 SAMM50Q9Y512 469 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 ASAP2O43150 1006 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 ZNF286BP0CG31 522 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 ABCD1P33897 745 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 PRKCEQ02156 737 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
SNHG3-202ENST00000437681 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
SNHG3-202ENST00000437681 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 PDLIM7Q9NR12 457 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
SNHG3-202ENST00000437681 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
SNHG3-202ENST00000437681 FAM237AA0A1B0GTK4 181 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 EML1O00423 815 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 EVI5O60447 810 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 MAFO75444 373 aaPredicted RBP12.83□□□□□ -0.36
SNHG3-202ENST00000437681 TIMP1P01033 207 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 ATP4AP20648 1035 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 TXLNAP40222 546 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 PTGISQ16647 500 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 TMEM119Q4V9L6 283 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 LXNQ9BS40 222 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
SNHG3-202ENST00000437681 SPTLC2O15270 562 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 PRKAG2Q9UGJ0 569 aa12.83□□□□□ -0.36
SNHG3-202ENST00000437681 EFCAB14O75071 495 aa12.82□□□□□ -0.36
SNHG3-202ENST00000437681 DGAT1O75907 488 aa12.82□□□□□ -0.36
SNHG3-202ENST00000437681 SPATA31C1P0DKV0 1188 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms