RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 IL17RAQ96F46 866 aa8.87□□□□□ -0.99
VPS50-203ENST00000436177 C11orf84Q9BUA3 381 aaPredicted RBP8.87□□□□□ -0.99
VPS50-203ENST00000436177 BCAS3Q9H6U6 928 aa8.87□□□□□ -0.99
VPS50-203ENST00000436177 RBM28Q9NW13 759 aaKnown RBP8.87□□□□□ -0.99
VPS50-203ENST00000436177 HCN4Q9Y3Q4 1203 aa8.87□□□□□ -0.99
VPS50-203ENST00000436177 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
VPS50-203ENST00000436177 MUC3AQ02505 3323 aa8.87□□□□□ -0.99
VPS50-203ENST00000436177 BAZ2BQ9UIF8 2168 aaKnown RBP8.86□□□□□ -0.99
VPS50-203ENST00000436177 PIEZO1Q92508 2521 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 RRN3P2A6NIE6 340 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 MAFGO15525 162 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 KCNA2P16389 499 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 ITGB5P18084 799 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 ZNF76P36508 570 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 MRPS6P82932 125 aaKnown RBP8.86□□□□□ -0.99
VPS50-203ENST00000436177 NBR1Q14596 966 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 RTN1Q16799 776 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 PUS10Q3MIT2 529 aaKnown RBP8.86□□□□□ -0.99
VPS50-203ENST00000436177 FAM26DQ5JW98 314 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 TMEM31Q5JXX7 168 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 IER5Q5VY09 327 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 TEX2Q8IWB9 1127 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 TMEM192Q8IY95 271 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 FIBCD1Q8N539 461 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 BANK1Q8NDB2 785 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 TOP1MTQ969P6 601 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 PPP2R3CQ969Q6 453 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 LRRC2Q9BYS8 371 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 LSG1Q9H089 658 aaKnown RBP8.86□□□□□ -0.99
VPS50-203ENST00000436177 FAM49AQ9H0Q0 323 aaPredicted RBP8.86□□□□□ -0.99
VPS50-203ENST00000436177 GLT8D2Q9H1C3 349 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 SLC9A2Q9UBY0 812 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 PCDHA6Q9UN73 950 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 PCDHA8Q9Y5H6 950 aa8.86□□□□□ -0.99
VPS50-203ENST00000436177 ADGRA3Q8IWK6 1321 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 GOLGA8AA7E2F4 631 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 GOLGA8BA8MQT2 603 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 H3BNC9 293 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 hCG_1984214I3L0E3 225 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 BACH1O14867 736 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 ZBTB43O43298 467 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 MAP3K7O43318 606 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 FOSP01100 380 aaPredicted RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 KCNC4Q03721 635 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 BTG3Q14201 252 aaPredicted RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 KRT32Q14532 448 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 LEXMQ3ZCV2 418 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 BMP2KLQ5H9B9 411 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 APOA5Q6Q788 366 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 RUFY4Q6ZNE9 571 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 TSHZ1Q6ZSZ6 1077 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 RPAINQ86UA6 219 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 SGMS1Q86VZ5 419 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 ZNF713Q8N859 430 aaPredicted RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 FAM122AQ96E09 287 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 NEK1Q96PY6 1258 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 NSUN3Q9H649 340 aaKnown RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 JADE2Q9NQC1 790 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 UBIAD1Q9Y5Z9 338 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 CDY2AQ9Y6F7 541 aa8.85□□□□□ -0.99
VPS50-203ENST00000436177 COL4A4P53420 1690 aaPredicted RBP8.85□□□□□ -0.99
VPS50-203ENST00000436177 TRIP12Q14669 1992 aaPredicted RBP8.84□□□□□ -0.99
VPS50-203ENST00000436177 CCDC196A0A1B0GTZ2 297 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.84□□□□□ -0.99
VPS50-203ENST00000436177 NCK2O43639 380 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 ATP9AO75110 1047 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 CSPG5O95196 566 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 CHRNA1P02708 482 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
VPS50-203ENST00000436177 STAG3L1P0CL83 205 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 INSRRP14616 1297 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 IBSPP21815 317 aaPredicted RBP8.84□□□□□ -0.99
VPS50-203ENST00000436177 PAK2Q13177 524 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 LPIN1Q14693 890 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 CSPP1Q1MSJ5 1256 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 FBXO47Q5MNV8 452 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 FAM160B1Q5W0V3 765 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 WWC2Q6AWC2 1192 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 GJD3Q8N144 294 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 CCDC12Q8WUD4 166 aaPredicted RBP8.84□□□□□ -0.99
VPS50-203ENST00000436177 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 MXRA8Q9BRK3 442 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 FTHL17Q9BXU8 183 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 ANO3Q9BYT9 981 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 LMAN2LQ9H0V9 348 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 RIC8AQ9NPQ8 531 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 KCNH7Q9NS40 1196 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 LRFN2Q9ULH4 789 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 TRPV2Q9Y5S1 764 aa8.84□□□□□ -0.99
VPS50-203ENST00000436177 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
VPS50-203ENST00000436177 XIRP2A4UGR9 3374 aa8.83□□□□□ -1
VPS50-203ENST00000436177 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
VPS50-203ENST00000436177 GSTTP1A0A1W2PQM5 241 aa8.83□□□□□ -1
VPS50-203ENST00000436177 MBLAC1A4D2B0 266 aaPredicted RBP8.83□□□□□ -1
VPS50-203ENST00000436177 H3BQ06 376 aaPredicted RBP8.83□□□□□ -1
VPS50-203ENST00000436177 DDX39AO00148 427 aaKnown RBP8.83□□□□□ -1
VPS50-203ENST00000436177 CDC45O75419 566 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms