RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 E2F5Q15329 346 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 MAPK6Q16659 721 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 PDIK1LQ8N165 341 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 EGFL8Q99944 293 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 PCDHA4Q9UN74 947 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 TJP3O95049 919 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 HSPA1AP0DMV8 641 aaKnown RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 HSPA1BP0DMV9 641 aaKnown RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 TCF3P15923 654 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 FBXO41Q8TF61 875 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 CD58P19256 250 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 NT5C2P49902 561 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 DHTKD1Q96HY7 919 aaPredicted RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 C2orf40Q9H1Z8 148 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 COPG1Q9Y678 874 aaKnown RBP12□□□□□ -0.49
SCN4A-201ENST00000435607 PRXQ9BXM0 1461 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 MYL1P05976 194 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 CENPUQ71F23 418 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 TEX9Q8N6V9 391 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 FAM96AQ9H5X1 160 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 STAP1Q9ULZ2 295 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 TRIM33Q9UPN9 1127 aa12□□□□□ -0.49
SCN4A-201ENST00000435607 CPB1P15086 417 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 PSMA2P25787 234 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■■□ 21.1
SCN4A-201ENST00000435607 ZSCAN9O15535 394 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 MXI1P50539 228 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 SLMAPQ14BN4 828 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 HABP4Q5JVS0 413 aaKnown RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 APPL2Q8NEU8 664 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 CNOT6LQ96LI5 555 aaKnown RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 DACH2Q96NX9 599 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 STN1Q9H668 368 aaKnown RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 CAPN11Q9UMQ6 739 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 PPP1R16BQ96T49 567 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 FAM170AA1A519 330 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 LRRIQ3A6PVS8 624 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 SLC9A5Q14940 896 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 UBE2TQ9NPD8 197 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 PALD1Q9ULE6 856 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 LRRD1A4D1F6 860 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 KPNA7A9QM74 516 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 CPA1P15085 419 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 CRLF3Q8IUI8 442 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 MB21D1Q8N884 522 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 NDFIP2Q9NV92 336 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 TJP2Q9UDY2 1190 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 ASMTLO95671 621 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 TEDDM1Q5T9Z0 273 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 ACAD11Q709F0 780 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 SMAP1Q8IYB5 467 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 CALR3Q96L12 384 aaKnown RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 C6orf203Q9P0P8 240 aaPredicted RBP11.99□□□□□ -0.49
SCN4A-201ENST00000435607 GCNT4Q9P109 453 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 SEL1LQ9UBV2 794 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 ABCA10Q8WWZ4 1543 aa11.99□□□□□ -0.49
SCN4A-201ENST00000435607 AARSP49588 968 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 FKBP3Q00688 224 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 PPARDQ03181 441 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 SPATA1Q5VX52 437 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 HSPH1Q92598 858 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CYP26B1Q9NR63 512 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ASNSD1Q9NWL6 643 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ANGPTL2Q9UKU9 493 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CLDN3O15551 220 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 LRRN2O75325 713 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 HSPA4LO95757 839 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 KRT72Q14CN4 511 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 FSCBQ5H9T9 825 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 PLEKHA4Q9H4M7 779 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 SARS2Q9NP81 518 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CASS4Q9NQ75 786 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 GNGT1P63211 74 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 BTN2A2Q8WVV5 523 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ZBTB40Q9NUA8 1239 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CLCN1P35523 988 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ADKP55263 362 aaKnown RBP11.98□□□□□ -0.49
SCN4A-201ENST00000435607 TMED2Q15363 201 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 TCP11X2Q5H9J9 407 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 SPATA16Q9BXB7 569 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 MAN1C1Q9NR34 630 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 ALDH1A2O94788 518 aa11.98□□□□□ -0.49
SCN4A-201ENST00000435607 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms