RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 ATG2AQ2TAZ0 1938 aa16.35■□□□□ 0.21
LINC01006-204ENST00000435354 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
LINC01006-204ENST00000435354 REC8O95072 547 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 LINC00271P0C7V0 271 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 CD52P31358 61 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 SLC26A2P50443 739 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 EVCP57679 992 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 CCDC60Q8IWA6 550 aaPredicted RBP16.34■□□□□ 0.21
LINC01006-204ENST00000435354 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
LINC01006-204ENST00000435354 MRPL38Q96DV4 380 aaKnown RBP16.34■□□□□ 0.21
LINC01006-204ENST00000435354 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 TRPV2Q9Y5S1 764 aa16.34■□□□□ 0.21
LINC01006-204ENST00000435354 WDR81Q562E7 1941 aa16.33■□□□□ 0.21
LINC01006-204ENST00000435354 MYH9P35579 1960 aaKnown RBP16.33■□□□□ 0.21
LINC01006-204ENST00000435354 EVPLQ92817 2033 aa16.33■□□□□ 0.21
LINC01006-204ENST00000435354 ZBTB42B2RXF5 422 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 H3BNC9 293 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 RPLP2P05387 115 aaKnown RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 PDIA3P30101 505 aaKnown RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 IER5Q5VY09 327 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 MTHFD1LQ6UB35 978 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 CCDC12Q8WUD4 166 aaPredicted RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 UBE2ZQ9H832 354 aaPredicted RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
LINC01006-204ENST00000435354 SQORQ9Y6N5 450 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
LINC01006-204ENST00000435354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.32■□□□□ 0.2
LINC01006-204ENST00000435354 SMIM35A0A1B0GVV1 85 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 BACH1O14867 736 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 EDIL3O43854 480 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 IFNAR1P17181 557 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 ATP4AP20648 1035 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 PSMA5P28066 241 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 GPM6BQ13491 265 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 FAM160B1Q5W0V3 765 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 MCTP2Q6DN12 878 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 CRIPAKQ8N1N5 446 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 LENG9Q96B70 501 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 ZNF689Q96CS4 500 aaPredicted RBP16.32■□□□□ 0.2
LINC01006-204ENST00000435354 ZNF577Q9BSK1 485 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
LINC01006-204ENST00000435354 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
LINC01006-204ENST00000435354 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 PADI3Q9ULW8 664 aa16.32■□□□□ 0.2
LINC01006-204ENST00000435354 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 HBP1O60381 514 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 DGKIO75912 1065 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 KLRC1P26715 233 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 GNA11P29992 359 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 CIITAP33076 1130 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
LINC01006-204ENST00000435354 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
LINC01006-204ENST00000435354 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
LINC01006-204ENST00000435354 SWSAP1Q6NVH7 229 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 MIS18BP1Q6P0N0 1132 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 FIBCD1Q8N539 461 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 KIAA1671Q9BY89 1806 aa16.31■□□□□ 0.2
LINC01006-204ENST00000435354 COL1A2P08123 1366 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 M0QZ92 97 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 CTNNB1P35222 781 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 BMPR1AP36894 532 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 KRT76Q01546 638 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
LINC01006-204ENST00000435354 PTPROQ16827 1216 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 PRR16Q569H4 304 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 ZNF746Q6NUN9 644 aaPredicted RBP16.3■□□□□ 0.2
LINC01006-204ENST00000435354 KIAA0319LQ8IZA0 1049 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 NME8Q8N427 588 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
LINC01006-204ENST00000435354 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 TBC1D22BQ9NU19 505 aa16.3■□□□□ 0.2
LINC01006-204ENST00000435354 MAFBQ9Y5Q3 323 aaPredicted RBP16.3■□□□□ 0.2
LINC01006-204ENST00000435354 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
LINC01006-204ENST00000435354 KCNA5P22460 613 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 PAK2Q13177 524 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 TCEAL5Q5H9L2 206 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 BICD2Q8TD16 824 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
LINC01006-204ENST00000435354 FTHL17Q9BXU8 183 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms