RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 KLHL24Q6TFL4 600 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 ZNF438Q7Z4V0 828 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 APPBP2Q92624 585 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 MSTO1Q9BUK6 570 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 MAGEB5Q9BZ81 275 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 PCDHA5Q9Y5H7 936 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 ZW10O43264 779 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 CYP2B6P20813 491 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 NUP62P37198 522 aaPredicted RBP9.92□□□□□ -0.82
DSC3-202ENST00000434452 ZBTB17Q13105 803 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 PLCL1Q15111 1095 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 BEST2Q8NFU1 509 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 PPP1R13BQ96KQ4 1090 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 ZNF512Q96ME7 567 aaPredicted RBP9.92□□□□□ -0.82
DSC3-202ENST00000434452 SEPT5Q99719 369 aaPredicted RBP9.92□□□□□ -0.82
DSC3-202ENST00000434452 ZWILCHQ9H900 591 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 NDOR1Q9UHB4 597 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 APPL1Q9UKG1 709 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 COPG1Q9Y678 874 aaKnown RBP9.92□□□□□ -0.82
DSC3-202ENST00000434452 BUB1O43683 1085 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 CMTR1Q8N1G2 835 aaKnown RBP9.92□□□□□ -0.82
DSC3-202ENST00000434452 PHACTR3Q96KR7 559 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
DSC3-202ENST00000434452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.92□□□□□ -0.82
DSC3-202ENST00000434452 TRAPPC3O43617 180 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 CTNNA1P35221 906 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 NME3Q13232 169 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 ADAM9Q13443 819 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 PIP4K2CQ8TBX8 421 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 C9orf84Q5VXU9 1444 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 PRMT3O60678 531 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 TRIM27P14373 513 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 KCNA2P16389 499 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 SLC16A2P36021 539 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 MSH2P43246 934 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 SLC16A1P53985 500 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 PPARAQ07869 468 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
DSC3-202ENST00000434452 ACCSQ96QU6 501 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 GTSE1Q9NYZ3 720 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 MKL2Q9ULH7 1088 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 AATKQ6ZMQ8 1374 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 PRR23D1E9PI22 279 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 K7ERI5 159 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 HMGB3O15347 200 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 PRR23D2P0DMB1 279 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 COPB2P35606 906 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 POLR2FP61218 127 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 PRAMEP78395 509 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 MTBPQ96DY7 904 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 NRBF2Q96F24 287 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 EIF3CQ99613 913 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 CCDC90BQ9GZT6 254 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 H2AFY2Q9P0M6 372 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 HIST1H2AGP0C0S8 130 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 HIST1H2ADP20671 130 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 KRT20P35900 424 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 ATN1P54259 1190 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 LMNB2Q03252 620 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 TTLL4Q14679 1199 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 BHMTQ93088 406 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 HIST1H2AHQ96KK5 128 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 HIST1H2AJQ99878 128 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 H2AFJQ9BTM1 129 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 MUC3BQ9H195 1237 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 RNASEH1O60930 286 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 LMNAP02545 664 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 FCER1AP12319 257 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 KCNQ4P56696 695 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 MED21Q13503 144 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 OR6P1Q8NGX9 317 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 PLEKHA8Q96JA3 519 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 RPAP3Q9H6T3 665 aaPredicted RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 MEIS1O00470 390 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 ADKP55263 362 aaKnown RBP9.91□□□□□ -0.82
DSC3-202ENST00000434452 ATP8B2P98198 1209 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 ZNF394Q53GI3 561 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 DDX42Q86XP3 938 aaKnown RBP eCLIP9.91□□□□□ -0.82
DSC3-202ENST00000434452 KLHDC4Q8TBB5 520 aa9.91□□□□□ -0.82
DSC3-202ENST00000434452 SOS2Q07890 1332 aaPredicted RBP9.9□□□□□ -0.82
DSC3-202ENST00000434452 OPLAHO14841 1288 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 GTF2E2P29084 291 aaKnown RBP9.9□□□□□ -0.82
DSC3-202ENST00000434452 SLFN5Q08AF3 891 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 NR5A1Q13285 461 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 KDELC2Q7Z4H8 507 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 SDR42E1Q8WUS8 393 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 SLF1Q9BQI6 1058 aa9.9□□□□□ -0.82
DSC3-202ENST00000434452 UPF3AQ9H1J1 476 aaKnown RBP9.9□□□□□ -0.82
DSC3-202ENST00000434452 HOMER3Q9NSC5 361 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms