RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 RRP12Q5JTH9 1297 aaKnown RBP9.07□□□□□ -0.96
PTPRK-212ENST00000434424 ZNF610Q8N9Z0 462 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 LMBR1Q8WVP7 490 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 STRBPQ96SI9 672 aaKnown RBP9.07□□□□□ -0.96
PTPRK-212ENST00000434424 ELF4Q99607 663 aaPredicted RBP9.07□□□□□ -0.96
PTPRK-212ENST00000434424 ZDHHC5Q9C0B5 715 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 SMURF1Q9HCE7 757 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 AP5S1Q9NUS5 200 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 TCFL5Q9UL49 500 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 DAAM1Q9Y4D1 1078 aa9.07□□□□□ -0.96
PTPRK-212ENST00000434424 HTR3AP46098 478 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 JAM2P57087 298 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 SMAD2Q15796 467 aaKnown RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 GRAMD1BQ3KR37 738 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 ZNF648Q5T619 568 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 TTLL7Q6ZT98 887 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 MORC1Q86VD1 984 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 TSPYL5Q86VY4 417 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 PLD6Q8N2A8 252 aaKnown RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 FAM181AQ8N9Y4 354 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 TEKT5Q96M29 485 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
PTPRK-212ENST00000434424 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 JAM3Q9BX67 310 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 FOXP3Q9BZS1 431 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 FBXL7Q9UJT9 491 aa9.06□□□□□ -0.96
PTPRK-212ENST00000434424 MAP3K4Q9Y6R4 1608 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 HMGB1P1B2RPK0 211 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-212ENST00000434424 HIP1RO75146 1068 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 GNAT1P11488 350 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 AKAP5P24588 427 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 HHIPL2Q6UWX4 724 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 CYP2R1Q6VVX0 501 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 FRMD7Q6ZUT3 714 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
PTPRK-212ENST00000434424 DDX21Q9NR30 783 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPRK-212ENST00000434424 CUL7Q14999 1698 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 C7orf72A4D263 438 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 H7BY64 318 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 AP1G1O43747 822 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 KDM1AO60341 852 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 NPHS1O60500 1241 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 CTNND1O60716 968 aaKnown RBP9.04□□□□□ -0.96
PTPRK-212ENST00000434424 OFD1O75665 1012 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 ZRANB2O95218 330 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPRK-212ENST00000434424 KIF11P52732 1056 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 SPIRE1Q08AE8 756 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 CYP27C1Q4G0S4 372 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 ARHGAP36Q6ZRI8 547 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 EP400NLQ6ZTU2 488 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 STK11IPQ8N1F8 1099 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 PPM1EQ8WY54 764 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 CCM2LQ9NUG4 571 aaPredicted RBP9.04□□□□□ -0.96
PTPRK-212ENST00000434424 PUF60Q9UHX1 559 aaKnown RBP9.04□□□□□ -0.96
PTPRK-212ENST00000434424 ADAMTS6Q9UKP5 1117 aa9.04□□□□□ -0.96
PTPRK-212ENST00000434424 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
PTPRK-212ENST00000434424 DVL2O14641 736 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 FKTNO75072 461 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 AMY2AP04746 511 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 CD8BP10966 210 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 AMY2BP19961 511 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 LCE4AQ5TA78 99 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 ANGEL2Q5VTE6 544 aaKnown RBP9.03□□□□□ -0.96
PTPRK-212ENST00000434424 B3GNT9Q6UX72 402 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 ZZZ3Q8IYH5 903 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
PTPRK-212ENST00000434424 TMEM169Q96HH4 297 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 KRTAP4-9Q9BYQ8 210 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 CSRNP2Q9H175 543 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 SP110Q9HB58 689 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 BTG4Q9NY30 223 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 PCF11O94913 1555 aaKnown RBP9.03□□□□□ -0.96
PTPRK-212ENST00000434424 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
PTPRK-212ENST00000434424 RASSF10A6NK89 507 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 KCNK3O14649 394 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 FUT4P22083 530 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 CD96P40200 585 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 HSPA2P54652 639 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 ADCY1Q08828 1119 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 GALEQ14376 348 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 PDCD1Q15116 288 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 CEP68Q76N32 757 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 CATIPQ7Z7H3 387 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 PTRH1Q86Y79 214 aaKnown RBP9.02□□□□□ -0.97
PTPRK-212ENST00000434424 NETO1Q8TDF5 533 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 JADE3Q92613 823 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 RNF38Q9H0F5 515 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 MS4A5Q9H3V2 200 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 PPCSQ9HAB8 311 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 ACSS2Q9NR19 701 aa9.02□□□□□ -0.97
PTPRK-212ENST00000434424 MBNL3Q9NUK0 354 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms