RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 MIER3Q7Z3K6 550 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 RETREG2Q8NC44 543 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 SCLYQ96I15 445 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 TMEM60Q9H2L4 133 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 IL23AQ9NPF7 189 aa20.7■□□□□ 0.9
HLA-F-220ENST00000434407 ZBTB42B2RXF5 422 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 H3BQV1 296 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 CAND2O75155 1236 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 RFC2P35250 354 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 GPNMBQ14956 572 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 UGCGQ16739 394 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 TMEM240Q5SV17 173 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 BBXQ8WY36 941 aaPredicted RBP20.69■□□□□ 0.9
HLA-F-220ENST00000434407 TUBE1Q9UJT0 475 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 TRPC6Q9Y210 931 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 COL1A2P08123 1366 aa20.69■□□□□ 0.9
HLA-F-220ENST00000434407 PARNO95453 639 aaKnown RBP20.68■□□□□ 0.9
HLA-F-220ENST00000434407 ATP2B1P20020 1258 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 PDCP20941 246 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 MCM7P33993 719 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 SHHQ15465 462 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 TTC38Q5R3I4 469 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 C9orf50Q5SZB4 431 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 ZNF618Q5T7W0 954 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 TAF2Q6P1X5 1199 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 FAM167AQ96KS9 214 aa20.68■□□□□ 0.9
HLA-F-220ENST00000434407 NOL7Q9UMY1 257 aaKnown RBP20.68■□□□□ 0.9
HLA-F-220ENST00000434407 STBD1O95210 358 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 PFKMP08237 780 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 ZNF174Q15697 407 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 LRIT3Q3SXY7 679 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 ZNF484Q5JVG2 852 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 RUFY4Q6ZNE9 571 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 LRRC8DQ7L1W4 858 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 RPUSD2Q8IZ73 545 aaKnown RBP20.67■□□□□ 0.9
HLA-F-220ENST00000434407 C4orf32Q8N8J7 132 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.67■□□□□ 0.9
HLA-F-220ENST00000434407 PCDHA12Q9UN75 941 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 PCDHA2Q9Y5H9 948 aa20.67■□□□□ 0.9
HLA-F-220ENST00000434407 LOXHD1Q8IVV2 1947 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 SZT2Q5T011 3432 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 MARCH6O60337 910 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 CXCL10P02778 98 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 OATP04181 439 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 ACRP10323 421 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 THPOP40225 353 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 PRKCEQ02156 737 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 EPHA7Q15375 998 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 FAM26DQ5JW98 314 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 RASIP1Q5U651 963 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 PSRC1Q6PGN9 363 aaPredicted RBP20.66■□□□□ 0.9
HLA-F-220ENST00000434407 MTHFD1LQ6UB35 978 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 TRAPPC12Q8WVT3 735 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 TTC12Q9H892 705 aaPredicted RBP20.66■□□□□ 0.9
HLA-F-220ENST00000434407 SIP14410 1827 aa20.66■□□□□ 0.9
HLA-F-220ENST00000434407 RPLP2P05387 115 aaKnown RBP20.65■□□□□ 0.9
HLA-F-220ENST00000434407 P4HBP07237 508 aaKnown RBP20.65■□□□□ 0.9
HLA-F-220ENST00000434407 PSMC5P62195 406 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 IGBP1P78318 339 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 NBR1Q14596 966 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 MBTPS1Q14703 1052 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 RILPL1Q5EBL4 403 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 ZNF365Q70YC5 407 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 CKAP2LQ8IYA6 745 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 NRBP2Q9NSY0 501 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 PCDHB6Q9Y5E3 794 aa20.65■□□□□ 0.9
HLA-F-220ENST00000434407 SMIM35A0A1B0GVV1 85 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 NBNO60934 754 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 OR52Z1P0C646 297 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 SYT1P21579 422 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 KLRC1P26715 233 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 TXKP42681 527 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 QARSP47897 775 aaKnown RBP20.64■□□□□ 0.89
HLA-F-220ENST00000434407 TARBP2Q15633 366 aaKnown RBP20.64■□□□□ 0.89
HLA-F-220ENST00000434407 XKR3Q5GH77 459 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 HERVK_113Q902F9 699 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 ZBTB10Q96DT7 871 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 NIFKQ9BYG3 293 aaKnown RBP20.64■□□□□ 0.89
HLA-F-220ENST00000434407 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.64■□□□□ 0.89
HLA-F-220ENST00000434407 CEP131Q9UPN4 1083 aa20.64■□□□□ 0.89
HLA-F-220ENST00000434407 RSPH10B2B2RC85 870 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 C22orf31O95567 290 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 FGBP02675 491 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 RSPH10BP0C881 870 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 MGAT3Q09327 533 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 NCAPH2Q6IBW4 605 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 BRAPQ7Z569 592 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 BANK1Q8NDB2 785 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 DNAJB3Q8WWF6 145 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 HSD17B14Q9BPX1 270 aa20.63■□□□□ 0.89
HLA-F-220ENST00000434407 WRAP73Q9P2S5 460 aaPredicted RBP20.63■□□□□ 0.89
HLA-F-220ENST00000434407 DKC1O60832 514 aaKnown RBP eCLIP20.62■□□□□ 0.89
HLA-F-220ENST00000434407 CHRNA1P02708 482 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 DEFB128Q7Z7B8 93 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 RSPH3Q86UC2 560 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 C4orf19Q8IY42 314 aa20.62■□□□□ 0.89
HLA-F-220ENST00000434407 NME8Q8N427 588 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms