RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 NAALADL2Q58DX5 795 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 TMEM31Q5JXX7 168 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 PTCRAQ6ISU1 281 aaPredicted RBP16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 TYW1BQ6NUM6 668 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 MIS18BP1Q6P0N0 1132 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 NPAS4Q8IUM7 802 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 CYP2W1Q8TAV3 490 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 NEK9Q8TD19 979 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 KCNB2Q92953 911 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 TCEANC2Q96MN5 208 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 PCYT2Q99447 389 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 HCN4Q9Y3Q4 1203 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 IGSF9BQ9UPX0 1349 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 COL1A2P08123 1366 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 DGKIO75912 1065 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 ARP10275 920 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 SCG2P13521 617 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 CD52P31358 61 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 KRT76Q01546 638 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 TCEAL5Q5H9L2 206 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 CMTR2Q8IYT2 770 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 ATP8B4Q8TF62 1192 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 ZNF689Q96CS4 500 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 TBC1D22BQ9NU19 505 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 BDP1A6H8Y1 2624 aa16.91■□□□□ 0.3
RPUSD3-208ENST00000433972 IGKV6D-21A0A0A0MT36 114 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 GRXCR2A6NFK2 248 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 IPO5O00410 1097 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 CYP3A4P08684 503 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 PDXDC2PQ6P474 469 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 MTHFD1LQ6UB35 978 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 SMAP1Q8IYB5 467 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 GJD3Q8N144 294 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 P2RX5Q93086 422 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 ZMYND12Q9H0C1 365 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 ZNF302Q9NR11 478 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 LRFN2Q9ULH4 789 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 PADI3Q9ULW8 664 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
RPUSD3-208ENST00000433972 MMP1P03956 469 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 CDC27P30260 824 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 SSTR3P32745 418 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 COL19A1Q14993 1142 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 ABHD15Q6UXT9 468 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 CKAP2LQ8IYA6 745 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 CCDC148Q8NFR7 591 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 CLDND1Q9NY35 253 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 CEP131Q9UPN4 1083 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 NID2Q14112 1375 aa16.89■□□□□ 0.29
RPUSD3-208ENST00000433972 NCOR1O75376 2440 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 DDX39AO00148 427 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 GPR37L1O60883 481 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 ALADP13716 330 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 KLRC1P26715 233 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 ADD1P35611 737 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 JAKMIP3Q5VZ66 844 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 ZNF710Q8N1W2 664 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 EPHX3Q9H6B9 360 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 C1orf112Q9NSG2 853 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 TMEM260Q9NX78 707 aa16.88■□□□□ 0.29
RPUSD3-208ENST00000433972 DOCK5Q9H7D0 1870 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 H3BQ06 376 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 GPR182O15218 404 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 CCNE2O96020 404 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 PSAPP07602 524 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 APOBRQ0VD83 1088 aa16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 NFX1Q12986 1120 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-208ENST00000433972 Q6ZUG5 572 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms