RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SCYL1Q96KG9 808 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 MENTQ9BUN1 341 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 SMURF1Q9HCE7 757 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 GALNT8Q9NY28 637 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 ING1Q9UK53 422 aaPredicted RBP6.09□□□□□ -1.43
PTPN4-205ENST00000433888 OAZ3Q9UMX2 235 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 ATP23Q9Y6H3 246 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 SLC30A1Q9Y6M5 507 aa6.09□□□□□ -1.43
PTPN4-205ENST00000433888 MPIG6BO95866 241 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 COMTP21964 271 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 PTGS1P23219 599 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 GJA4P35212 333 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 EIF4HQ15056 248 aaKnown RBP6.08□□□□□ -1.44
PTPN4-205ENST00000433888 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 MAMDC4Q6UXC1 1216 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 USP51Q70EK9 711 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 MTDHQ86UE4 582 aaKnown RBP6.08□□□□□ -1.44
PTPN4-205ENST00000433888 CFHR4Q92496 578 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 EXOC2Q96KP1 924 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 AMNQ9BXJ7 453 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 INCENPQ9NQS7 918 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 ARHGAP28Q9P2N2 729 aa6.08□□□□□ -1.44
PTPN4-205ENST00000433888 CLASP2O75122 1294 aaKnown RBP6.07□□□□□ -1.44
PTPN4-205ENST00000433888 SRGAP2CP0DJJ0 459 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 MC4RP32245 332 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 RRADP55042 308 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 SUMO1P63165 101 aaKnown RBP6.07□□□□□ -1.44
PTPN4-205ENST00000433888 GUCY1A3Q02108 690 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 SEC23AQ15436 765 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 WDR72Q3MJ13 1102 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 TRIM68Q6AZZ1 485 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 POLNQ7Z5Q5 900 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 EXTL1Q92935 676 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 DPYSL5Q9BPU6 564 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 PCDHA9Q9Y5H5 950 aa6.07□□□□□ -1.44
PTPN4-205ENST00000433888 NPIPB8E9PQR5 432 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 OVOL3O00110 214 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 DIAPH1O60610 1272 aaKnown RBP6.06□□□□□ -1.44
PTPN4-205ENST00000433888 STK10O94804 968 aaKnown RBP6.06□□□□□ -1.44
PTPN4-205ENST00000433888 FAM153BP0C7A2 387 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 ACO1P21399 889 aaKnown RBP6.06□□□□□ -1.44
PTPN4-205ENST00000433888 HERVK_113P62684 666 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 ZNF568Q3ZCX4 644 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 USP39Q53GS9 565 aaKnown RBP6.06□□□□□ -1.44
PTPN4-205ENST00000433888 KANK2Q63ZY3 851 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 CKAP2LQ8IYA6 745 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 CDC6Q99741 560 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 BTBD2Q9BX70 525 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 SLITRK6Q9H5Y7 841 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
PTPN4-205ENST00000433888 CCDC66A2RUB6 948 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 KCNK3O14649 394 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 CRTAMO95727 393 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 KRT15P19012 456 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 GABREP78334 506 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 SSRP1Q08945 709 aaKnown RBP6.05□□□□□ -1.44
PTPN4-205ENST00000433888 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 MTERF2Q49AM1 385 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 PLA2G12BQ9BX93 195 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 ZNF341Q9BYN7 854 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 FBXO10Q9UK96 956 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 NR2E1Q9Y466 385 aa6.05□□□□□ -1.44
PTPN4-205ENST00000433888 CDC14BO60729 498 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 NAT1P18440 290 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 ECE1P42892 770 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 KCNQ1P51787 676 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 CRY1Q16526 586 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 LONRF2Q1L5Z9 754 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 LRSAM1Q6UWE0 723 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 KIAA1683Q9H0B3 1180 aa6.04□□□□□ -1.44
PTPN4-205ENST00000433888 CCDC9Q9Y3X0 531 aaKnown RBP6.04□□□□□ -1.44
PTPN4-205ENST00000433888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-205ENST00000433888 GSTA4O15217 222 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 NARSO43776 548 aaKnown RBP6.03□□□□□ -1.44
PTPN4-205ENST00000433888 HMGCRP04035 888 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 ADCY8P40145 1251 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 ST5P78524 1137 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 DGCR2P98153 550 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 CD83Q01151 205 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 FOXL1Q12952 345 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 NBPF6Q5VWK0 638 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 FSTL4Q6MZW2 842 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 USP30Q70CQ3 517 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 NOSTRINQ8IVI9 506 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 IL17DQ8TAD2 202 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 NBPF4Q96M43 638 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 MSL2Q9HCI7 577 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 CDC42EP3Q9UKI2 254 aa6.03□□□□□ -1.44
PTPN4-205ENST00000433888 MRPS23Q9Y3D9 190 aaKnown RBP6.03□□□□□ -1.44
PTPN4-205ENST00000433888 PRAMEF25A6NGN4 478 aa6.02□□□□□ -1.45
PTPN4-205ENST00000433888 U2SURPO15042 1029 aaKnown RBP6.02□□□□□ -1.45
PTPN4-205ENST00000433888 DNM2P50570 870 aa6.02□□□□□ -1.45
PTPN4-205ENST00000433888 HGFACQ04756 655 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms