RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TRIM75PA6NK02 468 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 NOTOA8MTQ0 251 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 IL33O95760 270 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 LTFP02788 710 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 C4BPAP04003 597 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 PDE6BP35913 854 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 ERVFRD-1P60508 538 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 MLC1Q15049 377 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 ZNF792Q3KQV3 632 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 ZC3H18Q86VM9 953 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 RBM12BQ8IXT5 1001 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 TCEAL8Q8IYN2 117 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 CBARPQ8N350 705 aaPredicted RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 CALML6Q8TD86 181 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 RTF1Q92541 710 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 TOE1Q96GM8 510 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 MAML3Q96JK9 1138 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 C16orf92Q96LL3 132 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 PDGFDQ9GZP0 370 aaPredicted RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 WNT8AQ9H1J5 351 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 DNAJC28Q9NX36 388 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 NOB1Q9ULX3 412 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 YBX2Q9Y2T7 364 aaKnown RBP7.77□□□□□ -1.17
USP54-206ENST00000433394 SIT1Q9Y3P8 196 aa7.77□□□□□ -1.17
USP54-206ENST00000433394 OR14I1A6ND48 311 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 ABLIM3O94929 683 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 APOL3O95236 402 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
USP54-206ENST00000433394 PF4V1P10720 104 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 FAHP16930 419 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 CYP2C19P33261 490 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 ROM1Q03395 351 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 LRRC41Q15345 812 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 INAVAQ3KP66 663 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 TMEM240Q5SV17 173 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 ZC3H14Q6PJT7 736 aaKnown RBP7.76□□□□□ -1.17
USP54-206ENST00000433394 LMBR1Q8WVP7 490 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 CLEC4DQ8WXI8 215 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 TSPAN17Q96FV3 270 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 KIRREL1Q96J84 757 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 RXFP1Q9HBX9 757 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 TCF7L1Q9HCS4 588 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 MBNL3Q9NUK0 354 aaKnown RBP7.76□□□□□ -1.17
USP54-206ENST00000433394 RCAN3Q9UKA8 241 aa7.76□□□□□ -1.17
USP54-206ENST00000433394 MED26O95402 600 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 ENPP1P22413 925 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 MAPKAPK2P49137 400 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 FSCN1Q16658 493 aaKnown RBP7.75□□□□□ -1.17
USP54-206ENST00000433394 UGT8Q16880 541 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 MINDY4Q4G0A6 757 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 TIGD5Q53EQ6 642 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 CATSPEREQ5SY80 951 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 FSTL4Q6MZW2 842 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 ESRP1Q6NXG1 681 aaKnown RBP7.75□□□□□ -1.17
USP54-206ENST00000433394 ETV3LQ6ZN32 361 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 CPA6Q8N4T0 437 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 ARRDC4Q8NCT1 418 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 RPGRQ92834 1020 aaKnown RBP7.75□□□□□ -1.17
USP54-206ENST00000433394 HSPBAP1Q96EW2 488 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 RAX2Q96IS3 184 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 NUP88Q99567 741 aaPredicted RBP7.75□□□□□ -1.17
USP54-206ENST00000433394 POLR3GLQ9BT43 218 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 RNF32Q9H0A6 362 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 C19orf73Q9NVV2 129 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 DTLQ9NZJ0 730 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 GABBR1Q9UBS5 961 aa7.75□□□□□ -1.17
USP54-206ENST00000433394 BIN1O00499 593 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 MMEP08473 750 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 SLC5A3P53794 718 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 NKX3-2P78367 333 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 PCBP2Q15366 365 aaKnown RBP eCLIP7.74□□□□□ -1.174e-9■■■■■ 37.7
USP54-206ENST00000433394 PRAMEF9Q5VWM5 478 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 CXorf67Q86X51 503 aaPredicted RBP7.74□□□□□ -1.17
USP54-206ENST00000433394 MAGEB6Q8N7X4 407 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 ASB15Q8WXK1 588 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 ALG3Q92685 438 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 INTS4Q96HW7 963 aaKnown RBP7.74□□□□□ -1.17
USP54-206ENST00000433394 PSMD1Q99460 953 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 RTFDC1Q9BY42 306 aaPredicted RBP7.74□□□□□ -1.17
USP54-206ENST00000433394 RHOBTB2Q9BYZ6 727 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 CSRNP2Q9H175 543 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 CCM2LQ9NUG4 571 aaPredicted RBP7.74□□□□□ -1.17
USP54-206ENST00000433394 ADAMTS6Q9UKP5 1117 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 ZBTB21Q9ULJ3 1066 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 TELO2Q9Y4R8 837 aa7.74□□□□□ -1.17
USP54-206ENST00000433394 MYL1P05976 194 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 ENO2P09104 434 aaPredicted RBP7.73□□□□□ -1.17
USP54-206ENST00000433394 GALK1P51570 392 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 PRR5P85299 388 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
USP54-206ENST00000433394 HDAC1Q13547 482 aaPredicted RBP7.73□□□□□ -1.17
USP54-206ENST00000433394 GTF2H3Q13889 308 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 SEC23AQ15436 765 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 RPTNQ6XPR3 784 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 FAM126BQ8IXS8 530 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 MIER2Q8N344 545 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 FLAD1Q8NFF5 587 aa7.73□□□□□ -1.17
USP54-206ENST00000433394 TGFBRAP1Q8WUH2 860 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms