RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CYTH1Q15438 398 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 STK11Q15831 433 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CCNI2Q6ZMN8 369 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TBC1D1Q86TI0 1168 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CROCCP3Q8IVE0 287 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 GATA6Q92908 595 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 USH1CQ9Y6N9 552 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 FANCAO15360 1455 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TRIM64BA6NI03 449 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 LRRC72A6NJI9 287 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 OR5K4A6NMS3 321 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TRAPPC3O43617 180 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ACSL4O60488 711 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 RNGTTO60942 597 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ADAM23O75077 832 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TJP3O95049 919 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 HOXB1P14653 301 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 VAV1P15498 845 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CBX5P45973 191 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 PTDSS1P48651 473 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 NR2C2P49116 596 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 NFE2L1Q14494 772 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 GSTA3Q16772 222 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 PATL1Q86TB9 770 aaKnown RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 CCNJLQ8IV13 435 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-202ENST00000432954 HCAR2Q8TDS4 363 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 NAT14Q8WUY8 206 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 ARL8AQ96BM9 186 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 KRT23Q9C075 422 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 FANCFQ9NPI8 374 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
CCDC171-202ENST00000432954 MAGEB3O15480 346 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 NCK2O43639 380 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 CYP1A1P04798 512 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 CHGBP05060 677 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 NR1D1P20393 614 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 M6PRP20645 277 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 KCNA3P22001 575 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 GALK1P51570 392 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 BLVRAP53004 296 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 IGBP1P78318 339 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ITGA9Q13797 1035 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 KPNB1Q14974 876 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ZBED8Q8IZ13 594 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 GAB3Q8WWW8 586 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 PGBD4Q96DM1 585 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 EPB41L1Q9H4G0 881 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 C12orf4Q9NQ89 552 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 HGSO14964 777 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 YKT6O15498 198 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ATP9AO75110 1047 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 FGAP02671 866 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 PABPC4LP0CB38 370 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 GSPT1P15170 499 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 EVI2BP34910 448 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TXKP42681 527 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 FLIIQ13045 1269 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 NONOQ15233 471 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TRIM67Q6ZTA4 783 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 GALNT7Q86SF2 657 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 FLCNQ8NFG4 579 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 FBXL18Q96ME1 805 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 MRPL9Q9BYD2 267 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TUT1Q9H6E5 874 aaKnown RBP11.78□□□□□ -0.52
CCDC171-202ENST00000432954 ANO2Q9NQ90 1003 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 TRIM10Q9UDY6 481 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 MOSPD1Q9UJG1 213 aa11.78□□□□□ -0.52
CCDC171-202ENST00000432954 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.52
CCDC171-202ENST00000432954 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.52
CCDC171-202ENST00000432954 MYOM2P54296 1465 aa11.77□□□□□ -0.53
CCDC171-202ENST00000432954 ZW10O43264 779 aa11.77□□□□□ -0.53
CCDC171-202ENST00000432954 STX10O60499 249 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms