RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 HSD17B4P51659 736 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 RPS6P62753 249 aaKnown RBP9.18□□□□□ -0.94
HDAC9-212ENST00000432645 ADAM9Q13443 819 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 TERF2Q15554 542 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 MAN2A1Q16706 1144 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 RINT1Q6NUQ1 792 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 FBXO38Q6PIJ6 1188 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 MAEAQ7L5Y9 396 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 PIK3R5Q8WYR1 880 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 SH2D3AQ9BRG2 576 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 POLR3CQ9BUI4 534 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-212ENST00000432645 TTYH3Q9C0H2 523 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 SAMM50Q9Y512 469 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 COL4A3BPQ9Y5P4 624 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 TBCAO75347 108 aaKnown RBP9.18□□□□□ -0.94
HDAC9-212ENST00000432645 GCNT3O95395 438 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 EYA4O95677 639 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 PTPRAP18433 802 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-212ENST00000432645 BACE1P56817 501 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 PPP2R5CQ13362 524 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 DCAF15Q66K64 600 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 KSR1Q8IVT5 923 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 SCYL3Q8IZE3 742 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 TRERF1Q96PN7 1200 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 DNAJC7Q99615 494 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 MXRA8Q9BRK3 442 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 KCTD10Q9H3F6 313 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 TRIM10Q9UDY6 481 aa9.18□□□□□ -0.94
HDAC9-212ENST00000432645 EPN1Q9Y6I3 576 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-212ENST00000432645 LTBP3Q9NS15 1303 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 PCNTO95613 3336 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 FRMD3A2A2Y4 597 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 NDUFA10O95299 355 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 FECHP22830 423 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 MRPS9P82933 396 aaKnown RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 APBA1Q02410 837 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ZNF569Q5MCW4 686 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ZNF280CQ8ND82 737 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 SYTL5Q8TDW5 730 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ERGIC2Q96RQ1 377 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 LXNQ9BS40 222 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 L2HGDHQ9H9P8 463 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 GPRC5DQ9NZD1 345 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ERICH4A6NGS2 130 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 VWA5AO00534 786 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ZBED4O75132 1171 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 TUBB4AP04350 444 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 PLEKP08567 350 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 PAX7P23759 505 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 NR2F2P24468 414 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 HOXD13P35453 343 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ERCC6LQ2NKX8 1250 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ZC2HC1CQ53FD0 456 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 MYCT1Q8N699 235 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 NUP58Q9BVL2 599 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 TEKT3Q9BXF9 490 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 ZNHIT6Q9NWK9 470 aaKnown RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
HDAC9-212ENST00000432645 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
HDAC9-212ENST00000432645 CLIC2O15247 247 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 KIF5CO60282 957 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 NMT1P30419 496 aaKnown RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 USP14P54578 494 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 ZBED6P86452 979 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 MCF2L2Q86YR7 1114 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 CARD6Q9BX69 1037 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 TUFT1Q9NNX1 390 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 GUCA1BQ9UMX6 200 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 REXO2Q9Y3B8 237 aaKnown RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 NUB1Q9Y5A7 615 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 DDNO94850 711 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 FAM13AO94988 1023 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 ITGB3BPQ13352 177 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 MTMR1Q13613 665 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 KNOP1Q1ED39 458 aaKnown RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 TKFCQ3LXA3 575 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 RRAGAQ7L523 313 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 ZNF397Q8NF99 534 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 ERO1AQ96HE7 468 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 NHEJ1Q9H9Q4 299 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-212ENST00000432645 NLRC4Q9NPP4 1024 aa9.16□□□□□ -0.94
HDAC9-212ENST00000432645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms