RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 GFPT2O94808 682 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 RPLP1P05386 114 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 ARSDP51689 593 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 RELBQ01201 579 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SP3Q02447 781 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 E2F5Q15329 346 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 CDC37Q16543 378 aaPredicted RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 ATP2B3Q16720 1220 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 PTPN21Q16825 1174 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SYNPOQ8N3V7 929 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 PI4K2BQ8TCG2 481 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 KISS1RQ969F8 398 aaPredicted RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SH3KBP1Q96B97 665 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 GTPBP4Q9BZE4 634 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SEC31BQ9NQW1 1179 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SAP30BPQ9UHR5 308 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 PYCARDQ9ULZ3 195 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 KIAA0100Q14667 2235 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 GPR39O43194 453 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 ECEL1O95672 775 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 UBTFL1P0CB47 393 aaPredicted RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 CCDC192P0DO97 292 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 TARSP26639 723 aaKnown RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 CASP2P42575 452 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 C4orf17Q53FE4 359 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 NXNQ6DKJ4 435 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 FAM47EQ6ZV65 393 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 FGD2Q7Z6J4 655 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 PDCL2Q8N4E4 241 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 CHMP4CQ96CF2 233 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 ZNF496Q96IT1 587 aaPredicted RBP6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 LRRC3Q9BY71 257 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 USP44Q9H0E7 712 aa6.98□□□□□ -1.29
NIPAL3-205ENST00000432012 NEMP1O14524 444 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ORC4O43929 436 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 DNAJA2O60884 412 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 APPP05067 770 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 CASTP20810 708 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 GJB2P29033 226 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 MAP3K12Q12852 859 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 SAFBQ15424 915 aaKnown RBP eCLIP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 KIF4BQ2VIQ3 1234 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 TMEM214Q6NUQ4 689 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 C1orf122Q6ZSJ8 110 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 EPM2AIP1Q7L775 607 aaPredicted RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ARMC9Q7Z3E5 817 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 KCT2Q8NC54 265 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 CD99L2Q8TCZ2 262 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ANKRD7Q92527 254 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 CRTAC1Q9NQ79 661 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ARHGEF4Q9NR80 690 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 SMYD2Q9NRG4 433 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 PPM1HQ9ULR3 514 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 MAPRE3Q9UPY8 281 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 MTMR6Q9Y217 621 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 TMX2Q9Y320 296 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ATP6V0A2Q9Y487 856 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 POLR2AP24928 1970 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 CTIFO43310 598 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 LARGE1O95461 756 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ZBTB48P10074 688 aaPredicted RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 NCAM1P13591 858 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 ZNF165P49910 485 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 UBE2Q1Q7Z7E8 422 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 RPAINQ86UA6 219 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 CCDC83Q8IWF9 413 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 NDUFAF2Q8N183 169 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 SPC24Q8NBT2 197 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 AP1M1Q9BXS5 423 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 MIR1-1HGQ9H1L0 117 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 HYPKQ9NX55 129 aa6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
NIPAL3-205ENST00000432012 TMEM265A0A087WTH1 108 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 PRAMEF22A3QJZ6 481 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 SURF6O75683 361 aaKnown RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 DNAJC8O75937 253 aaPredicted RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 MBD4O95243 580 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 HOXC13P31276 330 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 ATICP31939 592 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 HTR3AP46098 478 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 DGKGP49619 791 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 IGF2-ASQ6U949 168 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 CWC27Q6UX04 472 aaKnown RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 LDHAL6AQ6ZMR3 332 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 NSUN6Q8TEA1 469 aaKnown RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 CDK15Q96Q40 435 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 BARD1Q99728 777 aaKnown RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 CRB3Q9BUF7 120 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 C1QTNF1Q9BXJ1 281 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 SMOC1Q9H4F8 434 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 ALG13Q9NP73 1137 aaKnown RBP6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 GGA3Q9NZ52 723 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 CORINQ9Y5Q5 1042 aa6.96□□□□□ -1.29
NIPAL3-205ENST00000432012 HEG1Q9ULI3 1381 aa6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 HTATSF1O43719 755 aaKnown RBP6.96□□□□□ -1.3
NIPAL3-205ENST00000432012 CILPO75339 1184 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms