RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMARCE1-205ENST00000431889 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
SMARCE1-205ENST00000431889 CCDC60Q8IWA6 550 aaPredicted RBP16.25■□□□□ 0.19
SMARCE1-205ENST00000431889 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
SMARCE1-205ENST00000431889 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
SMARCE1-205ENST00000431889 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 DTNBO60941 627 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 SREBF1P36956 1147 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 TTC3P53804 2025 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 PTPROQ16827 1216 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 RPAINQ86UA6 219 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 PLA2G4DQ86XP0 818 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 PADI3Q9ULW8 664 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 TRPV2Q9Y5S1 764 aa16.24■□□□□ 0.19
SMARCE1-205ENST00000431889 RRN3P2A6NIE6 340 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 MEIS1O00470 390 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 MAFGO15525 162 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 KLRC1P26715 233 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 SSTR3P32745 418 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 SWSAP1Q6NVH7 229 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 GJA10Q969M2 543 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 ZNF668Q96K58 619 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 LRFN3Q9BTN0 628 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 PCDHGC5Q9Y5F6 944 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 SNX14Q9Y5W7 946 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 NFASCO94856 1347 aa16.23■□□□□ 0.19
SMARCE1-205ENST00000431889 LINC01565O15544 149 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 ATP4AP20648 1035 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 DNAJB1P25685 340 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 BMPR1AP36894 532 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 CCT2P78371 535 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 PAK2Q13177 524 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 PFKFB3Q16875 520 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 IER5Q5VY09 327 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 PPP1R18Q6NYC8 613 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 CKAP2LQ8IYA6 745 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 SAMD11Q96NU1 681 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 CELF4Q9BZC1 486 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 NCOA5Q9HCD5 579 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
SMARCE1-205ENST00000431889 M0QZ92 97 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 MGEA5O60502 916 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 DGKIO75912 1065 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 FOSP01100 380 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 SCG2P13521 617 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 KRT76Q01546 638 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 PKN1Q16512 942 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 TIGD5Q53EQ6 642 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 PDXDC2PQ6P474 469 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 ABHD15Q6UXT9 468 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 PLPPR4Q7Z2D5 763 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 TMEM40Q8WWA1 233 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 ZNF689Q96CS4 500 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 ZNF302Q9NR11 478 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 PLXNA4Q9HCM2 1894 aa16.21■□□□□ 0.19
SMARCE1-205ENST00000431889 IGLV3-22A0A075B6J6 115 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 DHX15O43143 795 aaKnown RBP16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 ATG7O95352 703 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 HYAL1Q12794 435 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 KRT32Q14532 448 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 PRR16Q569H4 304 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 FAM178BQ8IXR5 827 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 GJD3Q8N144 294 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 ZNF577Q9BSK1 485 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 C1QTNF1Q9BXJ1 281 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 NOC2LQ9Y3T9 749 aaKnown RBP16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 MYH9P35579 1960 aaKnown RBP16.21■□□□□ 0.18
SMARCE1-205ENST00000431889 WDFY4Q6ZS81 3184 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 IPO5O00410 1097 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 VTNP04004 478 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 IRS1P35568 1242 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 LTBRP36941 435 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 AP3B2Q13367 1082 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 KIZQ2M2Z5 673 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 METTL13Q8N6R0 699 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 NEK9Q8TD19 979 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 WDR81Q562E7 1941 aa16.2■□□□□ 0.18
SMARCE1-205ENST00000431889 IGSF9BQ9UPX0 1349 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 TRIOO75962 3097 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 IGKV6D-21A0A0A0MT36 114 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 ZBTB42B2RXF5 422 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 CAMK1Q14012 370 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms