RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 TSGA10IPQ3SY00 556 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 POTEBQ6S5H4 581 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 RTN4RL1Q86UN2 441 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 LINC01599Q8WXQ3 324 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM122AQ96E09 287 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 CELF4Q9BZC1 486 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 CLDND1Q9NY35 253 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 SMIM35A0A1B0GVV1 85 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 ATG7O95352 703 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 PAK2Q13177 524 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 KRT32Q14532 448 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 NME8Q8N427 588 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 PLVAPQ9BX97 442 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM217BQ9NTX9 383 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM50BQ9Y247 325 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 HCN4Q9Y3Q4 1203 aa17.25■□□□□ 0.35
CSNK1E-208ENST00000431611 IGSF9BQ9UPX0 1349 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 IGKV6D-21A0A0A0MT36 114 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM86C2PA6NEL3 165 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 BACH1O14867 736 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 CCNE2O96020 404 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 STAG3L1P0CL83 205 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 CDC27P30260 824 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 FGD1P98174 961 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 KRT76Q01546 638 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 MTHFD1LQ6UB35 978 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 NIPA1Q7RTP0 329 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 CMTR2Q8IYT2 770 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-208ENST00000431611 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 HBP1O60381 514 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 MMP1P03956 469 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 HMGB1P09429 215 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 KLRC1P26715 233 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 RCAN1P53805 252 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 HYAL1Q12794 435 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 ABHD15Q6UXT9 468 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 CRIPAKQ8N1N5 446 aa17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-208ENST00000431611 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM86B1E9PN63 330 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 CDC45O75419 566 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 CSPG5O95196 566 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 SCG2P13521 617 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 ADD1P35611 737 aaKnown RBP17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 LTBRP36941 435 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 NFX1Q12986 1120 aaKnown RBP17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 P2RX5Q93086 422 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 PRKAG3Q9UGI9 489 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 LRFN2Q9ULH4 789 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 PLAGL2Q9UPG8 496 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-208ENST00000431611 DHX15O43143 795 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 ALADP13716 330 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.358e-7■■■■□ 22
CSNK1E-208ENST00000431611 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 NAALADL2Q58DX5 795 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 MCTP2Q6DN12 878 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 MIS18BP1Q6P0N0 1132 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 CCDC60Q8IWA6 550 aaPredicted RBP17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 BRWD1Q9NSI6 2320 aa17.21■□□□□ 0.35
CSNK1E-208ENST00000431611 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 COL1A2P08123 1366 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 IGLV3-22A0A075B6J6 115 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 IPO5O00410 1097 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 RPS6KA5O75582 802 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 CYP3A4P08684 503 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 CPA1P15085 419 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 ZP2Q05996 745 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 CAMK1Q14012 370 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 ZNF484Q5JVG2 852 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms