RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TRIOO75962 3097 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 ENPP3O14638 875 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 IFIT3O14879 490 aaKnown RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 CYTH3O43739 400 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 DDAH1O94760 285 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 EYA4O95677 639 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 STAG3L1P0CL83 205 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 SLC26A2P50443 739 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 ZNF200P98182 395 aaPredicted RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 HIC1Q14526 733 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 TCTN1Q2MV58 587 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 HERC4Q5GLZ8 1057 aaPredicted RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 PDE12Q6L8Q7 609 aaKnown RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 CYFIP1Q7L576 1253 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 CRIPAKQ8N1N5 446 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 SMARCC2Q8TAQ2 1214 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 IGDCC4Q8TDY8 1250 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 RRP36Q96EU6 259 aaKnown RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 PIGSQ96S52 555 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 GLT8D2Q9H1C3 349 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 RC3H2Q9HBD1 1191 aaKnown RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 CD320Q9NPF0 282 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 FNDC1Q4ZHG4 1894 aaPredicted RBP9.53□□□□□ -0.88
CDH13-203ENST00000431540 KDM3AQ9Y4C1 1321 aa9.53□□□□□ -0.88
CDH13-203ENST00000431540 MYO10Q9HD67 2058 aa9.52□□□□□ -0.88
CDH13-203ENST00000431540 MEIS2O14770 477 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 DGKIO75912 1065 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 CHRNA1P02708 482 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 MMP1P03956 469 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 CYP21A2P08686 494 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
CDH13-203ENST00000431540 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.89
CDH13-203ENST00000431540 LIFRP42702 1097 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 UBE3AQ05086 875 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 ZP2Q05996 745 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 ADAM15Q13444 863 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 TSHZ1Q6ZSZ6 1077 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 CYB5R4Q7L1T6 521 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 PLPPR4Q7Z2D5 763 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
CDH13-203ENST00000431540 CTCFLQ8NI51 663 aaPredicted RBP9.52□□□□□ -0.89
CDH13-203ENST00000431540 LMBR1Q8WVP7 490 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 RSPH1Q8WYR4 309 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 MAP4K1Q92918 833 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 TMUB1Q9BVT8 246 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 SETD4Q9NVD3 440 aa9.52□□□□□ -0.89
CDH13-203ENST00000431540 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
CDH13-203ENST00000431540 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 FOSP01100 380 aaPredicted RBP9.51□□□□□ -0.89
CDH13-203ENST00000431540 LINC00271P0C7V0 271 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 IL9P15248 144 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 LTBRP36941 435 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 MGAT3Q09327 533 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 COASYQ13057 564 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
CDH13-203ENST00000431540 TCEAL5Q5H9L2 206 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 MCTP2Q6DN12 878 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 TMCO2Q7Z6W1 182 aaPredicted RBP9.51□□□□□ -0.89
CDH13-203ENST00000431540 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 PPP1R13LQ8WUF5 828 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 CDCA3Q99618 268 aaPredicted RBP9.51□□□□□ -0.89
CDH13-203ENST00000431540 PSTPIP2Q9H939 334 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 RAPGEFL1Q9UHV5 662 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 MTUS1Q9ULD2 1270 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 PCDHA2Q9Y5H9 948 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 NFASCO94856 1347 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 ADGRA3Q8IWK6 1321 aa9.51□□□□□ -0.89
CDH13-203ENST00000431540 TECTAO75443 2155 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 SMIM35A0A1B0GVV1 85 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 GSTTP1A0A1W2PQM5 241 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 E7EWF7 191 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 hCG_1984214I3L0E3 225 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 M0QZ92 97 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 MBTPS2O43462 519 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 ATG7O95352 703 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 KCNA2P16389 499 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 ATF7P17544 494 aaPredicted RBP9.5□□□□□ -0.89
CDH13-203ENST00000431540 TCF7P36402 384 aaPredicted RBP9.5□□□□□ -0.89
CDH13-203ENST00000431540 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 CBX2Q14781 532 aaPredicted RBP9.5□□□□□ -0.89
CDH13-203ENST00000431540 FBXO47Q5MNV8 452 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 TTC22Q5TAA0 569 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 B4GALNT3Q6L9W6 998 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 FAM117BQ6P1L5 589 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 SPRED2Q7Z698 418 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 HOMER1Q86YM7 354 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 NPAS4Q8IUM7 802 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 ZNF713Q8N859 430 aaPredicted RBP9.5□□□□□ -0.89
CDH13-203ENST00000431540 EDAQ92838 391 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 EPAS1Q99814 870 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 JADE2Q9NQC1 790 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
CDH13-203ENST00000431540 TUBE1Q9UJT0 475 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms