RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 BARHL2Q9NY43 387 aa15.85■□□□□ 0.13
SEC13-211ENST00000431352 RWDD3Q9Y3V2 267 aa15.85■□□□□ 0.13
SEC13-211ENST00000431352 MRPL42Q9Y6G3 142 aaKnown RBP15.85■□□□□ 0.13
SEC13-211ENST00000431352 MYO7AQ13402 2215 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 C5orf67F2Z3F1 127 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 CDC45O75419 566 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 CCNE2O96020 404 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 RB1P06400 928 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 PLA2G5P39877 138 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 GATMP50440 423 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 AP3B2Q13367 1082 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 PLPPR4Q7Z2D5 763 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 PLA2G4DQ86XP0 818 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 ZNF713Q8N859 430 aaPredicted RBP15.84■□□□□ 0.13
SEC13-211ENST00000431352 TNPO1Q92973 898 aaKnown RBP15.84■□□□□ 0.13
SEC13-211ENST00000431352 PPP1R16BQ96T49 567 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 IGFLR1Q9H665 355 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 ALG13Q9NP73 1137 aaKnown RBP15.84■□□□□ 0.13
SEC13-211ENST00000431352 FAM217BQ9NTX9 383 aaPredicted RBP15.84■□□□□ 0.13
SEC13-211ENST00000431352 PADI3Q9ULW8 664 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 PCDHA2Q9Y5H9 948 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 ATG2AQ2TAZ0 1938 aa15.84■□□□□ 0.13
SEC13-211ENST00000431352 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 MEIS1O00470 390 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 PPFIA3O75145 1194 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 DGKIO75912 1065 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 RPLP2P05387 115 aaKnown RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 METAP2P50579 478 aaKnown RBP eCLIP15.83■□□□□ 0.127e-7■■□□□ 12.4
SEC13-211ENST00000431352 KRT76Q01546 638 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 APOBRQ0VD83 1088 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 HYAL1Q12794 435 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 KRT32Q14532 448 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 PUS10Q3MIT2 529 aaKnown RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 FAM160B1Q5W0V3 765 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 MTHFD1LQ6UB35 978 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 CENPQQ7L2Z9 268 aaPredicted RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 RTN4RL1Q86UN2 441 aaPredicted RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 NPAS4Q8IUM7 802 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 CCDC60Q8IWA6 550 aaPredicted RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 CLP1Q92989 425 aaKnown RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 ZNF689Q96CS4 500 aaPredicted RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 FTHL17Q9BXU8 183 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 CELF4Q9BZC1 486 aaKnown RBP15.83■□□□□ 0.12
SEC13-211ENST00000431352 IGSF9BQ9UPX0 1349 aa15.83■□□□□ 0.12
SEC13-211ENST00000431352 TTC3P53804 2025 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 SMIM35A0A1B0GVV1 85 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 ADAMTS3O15072 1205 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 SCG2P13521 617 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 KLRC1P26715 233 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 GTF2F1P35269 517 aaKnown RBP eCLIP15.82■□□□□ 0.12
SEC13-211ENST00000431352 ADD1P35611 737 aaKnown RBP15.82■□□□□ 0.12
SEC13-211ENST00000431352 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
SEC13-211ENST00000431352 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
SEC13-211ENST00000431352 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 ATP8B4Q8TF62 1192 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 JAKMIP1Q96N16 626 aaKnown RBP15.82■□□□□ 0.12
SEC13-211ENST00000431352 LMAN2LQ9H0V9 348 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 GLT8D2Q9H1C3 349 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 TCEAL9Q9UHQ7 104 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 LRFN2Q9ULH4 789 aa15.82■□□□□ 0.12
SEC13-211ENST00000431352 PI4K2BG5E9Z4 385 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 MMP1P03956 469 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 STAG3L1P0CL83 205 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 DLX2Q07687 328 aaPredicted RBP15.81■□□□□ 0.12
SEC13-211ENST00000431352 PFKFB3Q16875 520 aaPredicted RBP15.81■□□□□ 0.12
SEC13-211ENST00000431352 SWSAP1Q6NVH7 229 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 MIS18BP1Q6P0N0 1132 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 ABHD15Q6UXT9 468 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 Q6ZUG5 572 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 CMTR2Q8IYT2 770 aaKnown RBP15.81■□□□□ 0.12
SEC13-211ENST00000431352 REXO1Q8N1G1 1221 aaKnown RBP15.81■□□□□ 0.12
SEC13-211ENST00000431352 BRF1Q92994 677 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 ZNF577Q9BSK1 485 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 PLVAPQ9BX97 442 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 PLAGL2Q9UPG8 496 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 FAM50BQ9Y247 325 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 SQORQ9Y6N5 450 aa15.81■□□□□ 0.12
SEC13-211ENST00000431352 KIAA1671Q9BY89 1806 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 IPO5O00410 1097 aaKnown RBP15.8■□□□□ 0.12
SEC13-211ENST00000431352 LINC01565O15544 149 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 HBP1O60381 514 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 GPR37L1O60883 481 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 TBX10O75333 385 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 ATG7O95352 703 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 ITGB1P05556 798 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
SEC13-211ENST00000431352 LTBRP36941 435 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 SLC26A2P50443 739 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 COL19A1Q14993 1142 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 TSGA10IPQ3SY00 556 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 NIPA1Q7RTP0 329 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 TEX2Q8IWB9 1127 aa15.8■□□□□ 0.12
SEC13-211ENST00000431352 RASGRP4Q8TDF6 673 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms