RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ZNF618Q5T7W0 954 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 RPAINQ86UA6 219 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 BBXQ8WY36 941 aaPredicted RBP19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 HAS1Q92839 578 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 WNT8BQ93098 351 aa19.58■□□□□ 0.72
CTDSP1-203ENST00000431127 COL1A2P08123 1366 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 IGSF9BQ9UPX0 1349 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 RSPH10B2B2RC85 870 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 H3BQV1 296 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 RSPH10BP0C881 870 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 ACTN1P12814 892 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 TRAPPC10P48553 1259 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 ZNF484Q5JVG2 852 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 MARCH8Q5T0T0 291 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 FAM109BQ6ICB4 259 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 DEFB128Q7Z7B8 93 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 HERVK_113Q902F9 699 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 FTOQ9C0B1 505 aaKnown RBP eCLIP19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 NRBP2Q9NSY0 501 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 NOL7Q9UMY1 257 aaKnown RBP19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 CEP131Q9UPN4 1083 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 STXBP5LQ9Y2K9 1186 aa19.57■□□□□ 0.72
CTDSP1-203ENST00000431127 ATP2B1P20020 1258 aa19.56■□□□□ 0.72
CTDSP1-203ENST00000431127 ATP4AP20648 1035 aa19.56■□□□□ 0.72
CTDSP1-203ENST00000431127 VAV3Q9UKW4 847 aa19.56■□□□□ 0.72
CTDSP1-203ENST00000431127 PCDHA2Q9Y5H9 948 aa19.56■□□□□ 0.72
CTDSP1-203ENST00000431127 KAT6AQ92794 2004 aa19.56■□□□□ 0.72
CTDSP1-203ENST00000431127 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 MCM7P33993 719 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 TRAF7Q6Q0C0 670 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 SNX21Q969T3 373 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 INTS4Q96HW7 963 aaKnown RBP19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 PCDHA12Q9UN75 941 aa19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 TRIP12Q14669 1992 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-203ENST00000431127 DKC1O60832 514 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 CXCL10P02778 98 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 OATP04181 439 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 PDCP20941 246 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 KLRC1P26715 233 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 PSMC5P62195 406 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 PRKCEQ02156 737 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 FAM26DQ5JW98 314 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 TTC38Q5R3I4 469 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 MCTP1Q6DN14 999 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 MTHFD1LQ6UB35 978 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 OTOP2Q7RTS6 562 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 VWCEQ96DN2 955 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 MTMR9Q96QG7 549 aa19.54■□□□□ 0.72
CTDSP1-203ENST00000431127 SMIM35A0A1B0GVV1 85 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 KIF28PB7ZC32 967 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 WNT7AO00755 349 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 ZNF862O60290 1169 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 NBNO60934 754 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 SMAD3P84022 425 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 GPNMBQ14956 572 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 EPHA7Q15375 998 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 XKR3Q5GH77 459 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 TRMT1LQ7Z2T5 733 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 NME8Q8N427 588 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 TRAPPC12Q8WVT3 735 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 TTC12Q9H892 705 aaPredicted RBP19.53■□□□□ 0.72
CTDSP1-203ENST00000431127 TANC1Q9C0D5 1861 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 ZBTB42B2RXF5 422 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 M0QZ92 97 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 EML1O00423 815 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 MAGEB2O15479 319 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 BAIAP3O94812 1187 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 P4HBP07237 508 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 CTSHP09668 335 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 TXKP42681 527 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 QARSP47897 775 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 SPIRE1Q08AE8 756 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 ZNF174Q15697 407 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 UGCGQ16739 394 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 IER5Q5VY09 327 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 NCAPH2Q6IBW4 605 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 CNKSR3Q6P9H4 555 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 FAM49AQ9H0Q0 323 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
CTDSP1-203ENST00000431127 ZBBXA8MT70 800 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 DLL1O00548 723 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 EFCAB14O75071 495 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 MBTPS1Q14703 1052 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 RILPL1Q5EBL4 403 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 BANK1Q8NDB2 785 aa19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 NIFKQ9BYG3 293 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 MYH9P35579 1960 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 LAMA2P24043 3122 aaKnown RBP19.51■□□□□ 0.71
CTDSP1-203ENST00000431127 ABHD14A-ACY1A0A1B0GW23 586 aa19.5■□□□□ 0.71
CTDSP1-203ENST00000431127 C22orf31O95567 290 aa19.5■□□□□ 0.71
CTDSP1-203ENST00000431127 CHRNA1P02708 482 aa19.5■□□□□ 0.71
CTDSP1-203ENST00000431127 OR52Z1P0C646 297 aa19.5■□□□□ 0.71
CTDSP1-203ENST00000431127 MRPS6P82932 125 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms