RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 ADCY7P51828 1080 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 RCAN1P53805 252 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 ZP2Q05996 745 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 BTG3Q14201 252 aaPredicted RBP21.27■■□□□ 1
AC004540.1-202ENST00000430548 TSGA10IPQ3SY00 556 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 RNF20Q5VTR2 975 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 NPAS4Q8IUM7 802 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 CMTR2Q8IYT2 770 aaKnown RBP21.27■■□□□ 1
AC004540.1-202ENST00000430548 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
AC004540.1-202ENST00000430548 P2RX5Q93086 422 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 PGBD1Q96JS3 809 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 NEK1Q96PY6 1258 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 BARHL2Q9NY43 387 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 TRPC6Q9Y210 931 aa21.27■■□□□ 1
AC004540.1-202ENST00000430548 MUC6Q6W4X9 2439 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 SMIM35A0A1B0GVV1 85 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 POTEB3A0JP26 581 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 MEIS1O00470 390 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 SLC26A2P50443 739 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 STAT5BP51692 787 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 HYAL1Q12794 435 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 RTN1Q16799 776 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 POTEBQ6S5H4 581 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 NIPA1Q7RTP0 329 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 RTN4RL1Q86UN2 441 aaPredicted RBP21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 TRAPPC12Q8WVT3 735 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 CRYGNQ8WXF5 182 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 CLDND1Q9NY35 253 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 MRPL42Q9Y6G3 142 aaKnown RBP21.26■□□□□ 0.99
AC004540.1-202ENST00000430548 NID2Q14112 1375 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 ZNF318Q5VUA4 2279 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 C19orf67A6NJJ6 358 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 PRR33A8MZF0 331 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 M0QZ92 97 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 ZBTB43O43298 467 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 SSTR3P32745 418 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 CAMK1Q14012 370 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 FAM43BQ6ZT52 329 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 DHX32Q7L7V1 743 aaKnown RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 CELF4Q9BZC1 486 aaKnown RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 GLT8D2Q9H1C3 349 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 FAM217BQ9NTX9 383 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 PADI3Q9ULW8 664 aa21.25■□□□□ 0.99
AC004540.1-202ENST00000430548 COL1A2P08123 1366 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 TBX10O75333 385 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 CCNE2O96020 404 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 PAK2Q13177 524 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 ADCK5Q3MIX3 580 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 MTHFD1LQ6UB35 978 aa21.24■□□□□ 0.99
AC004540.1-202ENST00000430548 IGLV3-22A0A075B6J6 115 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 SCG2P13521 617 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 ALADP13716 330 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 TMEM62Q0P6H9 643 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 SMAD2Q15796 467 aaKnown RBP21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 ABHD15Q6UXT9 468 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 CCDC60Q8IWA6 550 aaPredicted RBP21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 ADHFE1Q8IWW8 467 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 NME8Q8N427 588 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 TMX1Q9H3N1 280 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 TMEM260Q9NX78 707 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 PLAGL2Q9UPG8 496 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 TRIOO75962 3097 aa21.23■□□□□ 0.99
AC004540.1-202ENST00000430548 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 GOLGA8BA8MQT2 603 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 FAM86B1E9PN63 330 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 FAM86B2P0C5J1 330 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 CDC27P30260 824 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 DLX2Q07687 328 aaPredicted RBP21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 ATP8B4Q8TF62 1192 aa21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
AC004540.1-202ENST00000430548 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 ESYT2A0FGR8 921 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 ZBTB42B2RXF5 422 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 DHX15O43143 795 aaKnown RBP21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 MBTPS2O43462 519 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 DCXO43602 365 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 HBP1O60381 514 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 ITGB1P05556 798 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 CYP3A4P08684 503 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 STAG3L1P0CL83 205 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 DNAJB1P25685 340 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 KRT76Q01546 638 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 ERVK-5Q9HDB9 667 aa21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 ALG13Q9NP73 1137 aaKnown RBP21.21■□□□□ 0.99
AC004540.1-202ENST00000430548 GTF2F1P35269 517 aaKnown RBP eCLIP21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 SMAD4Q13485 552 aaKnown RBP21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 KRT32Q14532 448 aa21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 FAM160B1Q5W0V3 765 aa21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 SPPL3Q8TCT6 385 aa21.2■□□□□ 0.98
AC004540.1-202ENST00000430548 TMEM40Q8WWA1 233 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms