RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PLTPP55058 493 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 EIF3BP55884 814 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 PRPF4BQ13523 1007 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 GLG1Q92896 1179 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 TSC22D3Q99576 134 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 PLCD4Q9BRC7 762 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 DBR1Q9UK59 544 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 TCP11X1B4DZS4 312 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 TRAF5O00463 557 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 AHCYL1O43865 530 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 FGGP02679 453 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 PAPOLAP51003 745 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 PMS2P54278 862 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 GALNTL6Q49A17 601 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 ZNF571Q7Z3V5 609 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 EDEM3Q9BZQ6 932 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 NSRP1Q9H0G5 558 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 PAPOLBQ9NRJ5 636 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 SNX24Q9Y343 169 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 USP15Q9Y4E8 981 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 FOXO6A8MYZ6 492 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 USP17L12C9JPN9 530 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 USP17L21D6R901 530 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CCDC188H7C350 402 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 STXBP3O00186 592 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CES2O00748 559 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 OR52Z1P0C646 297 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 PPP1R2P41236 205 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 AMPD3Q01432 767 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 BNIP1Q12981 228 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 ANO7Q6IWH7 933 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 TBC1D7Q9P0N9 293 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 DUOX1Q9NRD9 1551 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 TNS3Q68CZ2 1445 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 M0R2N6 131 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 LIN7AO14910 233 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 MXRA7P84157 204 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 ATP11AP98196 1134 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 TRAF1Q13077 416 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CNGA2Q16280 664 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CWF19L1Q69YN2 538 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 SV2BQ7L1I2 683 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 ZNF526Q8TF50 670 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 SYN2Q92777 582 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 MAGEF1Q9HAY2 307 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 BLOC1S4Q9NUP1 217 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 DOCK2Q92608 1830 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CYP2D6P10635 497 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CREB1P16220 341 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 PSMD2Q13200 908 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 MKRN4PQ13434 485 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 UNC13DQ70J99 1090 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 FBXO25Q8TCJ0 367 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 PGM2Q96G03 612 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 PABPC3Q9H361 631 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 ZDHHC18Q9NUE0 388 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
SEMA4D-209ENST00000429836 CCDC169A6NNP5 214 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 LUC7L3O95232 432 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 OAS1P00973 400 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 FGFR4P22455 802 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 KIF5BP33176 963 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 TXKP42681 527 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 ZNF131P52739 623 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 POU5F1Q01860 360 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 LRRC63Q05C16 580 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
SEMA4D-209ENST00000429836 PCK1P35558 622 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms