RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 APOA5Q6Q788 366 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 EXOC4Q96A65 974 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 AK8Q96MA6 479 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 PPP1R16BQ96T49 567 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 XPO4Q9C0E2 1151 aaKnown RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SNX1Q13596 522 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SGO2Q562F6 1265 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 TTC19Q6DKK2 380 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-208ENST00000428599 CATSPER4Q7RTX7 472 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 CALN1Q9BXU9 219 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 MINPP1Q9UNW1 487 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
CTNND1-208ENST00000428599 EFCAB14O75071 495 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 MCAMP43121 646 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 OSTNP61366 133 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 DYNLT1P63172 113 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 ZBTB41Q5SVQ8 909 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 MAGOHBQ96A72 148 aaKnown RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 CEP19Q96LK0 163 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 JRKLQ9Y4A0 524 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 ECEL1O95672 775 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 BRD1O95696 1058 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SLFN12LQ6IEE8 588 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 TEKT4Q8WW24 435 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 CNOT6LQ96LI5 555 aaKnown RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 GDAP1L1Q96MZ0 367 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SFMBT1Q9UHJ3 866 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 PIK3C2BO00750 1634 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SUN1O94901 812 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 ESRRGP62508 458 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 ALCAMQ13740 583 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 VPS72Q15906 364 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SIRT2Q8IXJ6 389 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 CELF1Q92879 486 aaKnown RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 PPP2R3CQ969Q6 453 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 NR1H4Q96RI1 486 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 RGS12O14924 1447 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SNAP23O00161 211 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SNX2O60749 519 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SRGAP2CP0DJJ0 459 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 TRAPPC10P48553 1259 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 DRP2Q13474 957 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 SPATA1Q5VX52 437 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 RNF168Q8IYW5 571 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 MT-ND3P03897 115 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 CA4P22748 312 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 TNFAIP2Q03169 654 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 NFX1Q12986 1120 aaKnown RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 ART3Q13508 389 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 OR6B3Q8NGW1 331 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
CTNND1-208ENST00000428599 FAM49AQ9H0Q0 323 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-208ENST00000428599 TOM1L1O75674 476 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 PTGDRQ13258 359 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 NAA35Q5VZE5 725 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 GIMAP8Q8ND71 665 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CFAP36Q96G28 342 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 POLR3CQ9BUI4 534 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 PCIF1Q9H4Z3 704 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 EFCAB8A8MWE9 144 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 ECE2O60344 883 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CMA1P23946 247 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 EHHADHQ08426 723 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 MSTO1Q9BUK6 570 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 PACSIN2Q9UNF0 486 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CD58P19256 250 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 GNL1P36915 607 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CACNB3P54284 484 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 RASSF7Q02833 373 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 KSR1Q8IVT5 923 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CDHR2Q9BYE9 1310 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 CRKP46108 304 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 NSUN2Q08J23 767 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 FAM167AQ96KS9 214 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-208ENST00000428599 DYRK4Q9NR20 520 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 ZBED1O96006 694 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 OCRLQ01968 901 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 NLRP4Q96MN2 994 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 PIGSQ96S52 555 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 TUBB6Q9BUF5 446 aa9.61□□□□□ -0.87
CTNND1-208ENST00000428599 TMEM106CQ9BVX2 250 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms