RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 CASP10Q92851 521 aa16.68■□□□□ 0.26
PDE6D-203ENST00000428104 FAM49AQ9H0Q0 323 aaPredicted RBP16.68■□□□□ 0.26
PDE6D-203ENST00000428104 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
PDE6D-203ENST00000428104 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
PDE6D-203ENST00000428104 FGAP02671 866 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 MARK3P27448 753 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 MTHFRP42898 656 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 HAND2P61296 217 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 TMEM62Q0P6H9 643 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 PAK2Q13177 524 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 ALX1Q15699 326 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 MARCH8Q5T0T0 291 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 FAM102BQ5T8I3 360 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 MIER1Q8N108 512 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
PDE6D-203ENST00000428104 PNMA1Q8ND90 353 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 TYW1Q9NV66 732 aaKnown RBP16.67■□□□□ 0.26
PDE6D-203ENST00000428104 RALYQ9UKM9 306 aaKnown RBP16.67■□□□□ 0.26
PDE6D-203ENST00000428104 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 HCFC2Q9Y5Z7 792 aa16.67■□□□□ 0.26
PDE6D-203ENST00000428104 SPATA31C2B4DYI2 1134 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 SARSP49591 514 aaKnown RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 GNPTABQ3T906 1256 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 ASPRV1Q53RT3 343 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 RARS2Q5T160 578 aaKnown RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 FCHSD1Q86WN1 690 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
PDE6D-203ENST00000428104 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 LZTS1Q9Y250 596 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
PDE6D-203ENST00000428104 IGBP1P78318 339 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 PI4K2BQ8TCG2 481 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 INPP4AQ96PE3 977 aaPredicted RBP16.65■□□□□ 0.26
PDE6D-203ENST00000428104 RTEL1Q9NZ71 1219 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
PDE6D-203ENST00000428104 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
PDE6D-203ENST00000428104 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 SQORQ9Y6N5 450 aa16.65■□□□□ 0.26
PDE6D-203ENST00000428104 MGEA5O60502 916 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 EOMESO95936 686 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 TCF7P36402 384 aaPredicted RBP16.64■□□□□ 0.25
PDE6D-203ENST00000428104 PLCB3Q01970 1234 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 IER5Q5VY09 327 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 FEZF2Q8TBJ5 459 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 CWH43Q9H720 699 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 CYP26B1Q9NR63 512 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
PDE6D-203ENST00000428104 USTQ9Y2C2 406 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
PDE6D-203ENST00000428104 STK25O00506 426 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 FIBPO43427 364 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 PBX3P40426 434 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 TDGQ13569 410 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 KIAA1841Q6NSI8 718 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 MFSD6Q6ZSS7 791 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 KAT14Q9H8E8 782 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 NEDD4P46934 1319 aa16.63■□□□□ 0.25
PDE6D-203ENST00000428104 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
PDE6D-203ENST00000428104 GCOM1H8Y6P7 765 aaPredicted RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 M0QZ92 97 aa16.62■□□□□ 0.25
PDE6D-203ENST00000428104 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 POLR2MP0CAP2 368 aa16.62■□□□□ 0.25
PDE6D-203ENST00000428104 FGFR1P11362 822 aa16.62■□□□□ 0.25
PDE6D-203ENST00000428104 LAG3P18627 525 aa16.62■□□□□ 0.25
PDE6D-203ENST00000428104 ATXN1P54253 815 aaKnown RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 ZC3H14Q6PJT7 736 aaKnown RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
PDE6D-203ENST00000428104 NARSO43776 548 aaKnown RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 CLASP2O75122 1294 aaKnown RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 SP9P0CG40 484 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 MS4A1P11836 297 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 PDE4AP27815 886 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 COL9A2Q14055 689 aaPredicted RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 ATAT1Q5SQI0 421 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 STAG2Q8N3U4 1231 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 MRPL43Q8N983 215 aaKnown RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 SUMF1Q8NBK3 374 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 ADAM2Q99965 735 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 CELF4Q9BZC1 486 aaKnown RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
PDE6D-203ENST00000428104 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
PDE6D-203ENST00000428104 KRBA1A5PL33 1030 aa16.6■□□□□ 0.25
PDE6D-203ENST00000428104 C2orf71A6NGG8 1288 aa16.6■□□□□ 0.25
PDE6D-203ENST00000428104 STAM2O75886 525 aa16.6■□□□□ 0.25
PDE6D-203ENST00000428104 INSRRP14616 1297 aa16.6■□□□□ 0.25
PDE6D-203ENST00000428104 SMC1AQ14683 1233 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms