RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 XPNPEP3Q9NQH7 507 aa9.24□□□□□ -0.93
SMARCAL1-206ENST00000427645 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
SMARCAL1-206ENST00000427645 VAV3Q9UKW4 847 aa9.24□□□□□ -0.93
SMARCAL1-206ENST00000427645 SPTBN5Q9NRC6 3674 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-206ENST00000427645 PLXNA1Q9UIW2 1896 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 DHX15O43143 795 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 PQBP1O60828 265 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 RGS20O76081 388 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SMC2O95347 1197 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 P4HBP07237 508 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 RARBP10826 455 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 XRCC6P12956 609 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 JAK3P52333 1124 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SNX17Q15036 470 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 KARSQ15046 597 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 E2F4Q16254 413 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 B3GNT9Q6UX72 402 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SEPT14Q6ZU15 432 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 MIER3Q7Z3K6 550 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SMAP1Q8IYB5 467 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 HSD17B14Q9BPX1 270 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 TINF2Q9BSI4 451 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 MMTAG2Q9BU76 263 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 BMP2KQ9NSY1 1161 aaPredicted RBP9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 DNM3Q9UQ16 869 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 FRMPD3Q5JV73 1810 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 ASTN1O14525 1302 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 SYNGAP1Q96PV0 1343 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 LCTP09848 1927 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
SMARCAL1-206ENST00000427645 ZNF236Q9UL36 1845 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 SYCE3A1L190 88 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 MYADML2A6NDP7 307 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 PP2D1A8MPX8 630 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 WDR64B1ANS9 1081 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 ATP9AO75110 1047 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 SLITRK3O94933 977 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 CAVIN2O95810 425 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 CLTBP09497 229 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 ZNF865P0CJ78 1059 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 CCDC192P0DO97 292 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 KCNA2P16389 499 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 GRB10Q13322 594 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 ITGB3BPQ13352 177 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 TTLL4Q14679 1199 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 POSTNQ15063 836 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 IQSEC1Q6DN90 963 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 PDXDC2PQ6P474 469 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 ARMCX2Q7L311 632 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 CATSPER3Q86XQ3 398 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 MAFAQ8NHW3 353 aaPredicted RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 SCFD2Q8WU76 684 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 GJA10Q969M2 543 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 CCDC47Q96A33 483 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 FGD4Q96M96 766 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 NACC1Q96RE7 527 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 EIF2AK1Q9BQI3 630 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 UNC45AQ9H3U1 944 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 SLC9A2Q9UBY0 812 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 DDX41Q9UJV9 622 aaKnown RBP9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 PCDHA10Q9Y5I2 948 aa9.22□□□□□ -0.93
SMARCAL1-206ENST00000427645 A0A087X0B3 334 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 RBM47A0AV96 593 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 CHMP2AO43633 222 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 PSAPP07602 524 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 RAG1P15918 1043 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 PLCG1P19174 1290 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 QARSP47897 775 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 TMEM119Q4V9L6 283 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 MIS18BP1Q6P0N0 1132 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 METTL7BQ6UX53 244 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 RNF180Q86T96 592 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 TPH2Q8IWU9 490 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 TRIML1Q8N9V2 468 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 LARP4BQ92615 738 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 RNPC3Q96LT9 517 aaKnown RBP9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 PNMA5Q96PV4 448 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 GSDMAQ96QA5 445 aa9.21□□□□□ -0.94
SMARCAL1-206ENST00000427645 UIMC1Q96RL1 719 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms