RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TXKP42681 527 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 IGBP1P78318 339 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 PRKCEQ02156 737 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 NCAPH2Q6IBW4 605 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 WNT8BQ93098 351 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 OATP04181 439 aa28.27■■■□□ 2.12
HERPUD2-205ENST00000427455 CKBP12277 381 aa28.27■■■□□ 2.12
HERPUD2-205ENST00000427455 MARCH8Q5T0T0 291 aa28.27■■■□□ 2.12
HERPUD2-205ENST00000427455 TAF2Q6P1X5 1199 aa28.27■■■□□ 2.12
HERPUD2-205ENST00000427455 PCDHB6Q9Y5E3 794 aa28.27■■■□□ 2.12
HERPUD2-205ENST00000427455 A0A1W2PPC1 479 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 CAND2O75155 1236 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 SELPP16109 830 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 EPHA7Q15375 998 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 ZNF484Q5JVG2 852 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 LRRC8DQ7L1W4 858 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 BANK1Q8NDB2 785 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 SCLYQ96I15 445 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 CEP131Q9UPN4 1083 aa28.26■■■□□ 2.11
HERPUD2-205ENST00000427455 IQCF3P0C7M6 154 aa28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 RFC2P35250 354 aa28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 THPOP40225 353 aa28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 PSMC5P62195 406 aa28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 TRAPPC12Q8WVT3 735 aa28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.25■■■□□ 2.11
HERPUD2-205ENST00000427455 TRIOBPQ9H2D6 2365 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 ZBTB42B2RXF5 422 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 LAD1O00515 517 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 DKC1O60832 514 aaKnown RBP eCLIP28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 P4HBP07237 508 aaKnown RBP28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 QARSP47897 775 aaKnown RBP28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 EPHB4P54760 987 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 RUFY4Q6ZNE9 571 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 TRMT1LQ7Z2T5 733 aaKnown RBP28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 FERMT3Q86UX7 667 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 TDHQ8IZJ6 230 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 C4orf32Q8N8J7 132 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 IL23AQ9NPF7 189 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 NRBP2Q9NSY0 501 aa28.24■■■□□ 2.11
HERPUD2-205ENST00000427455 STX6O43752 255 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 PARNO95453 639 aaKnown RBP28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 RPLP2P05387 115 aaKnown RBP28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 PTGDRQ13258 359 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 XKR3Q5GH77 459 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 ZNF618Q5T7W0 954 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 PSRC1Q6PGN9 363 aaPredicted RBP28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 RPAINQ86UA6 219 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 MTMR6Q9Y217 621 aa28.23■■■□□ 2.11
HERPUD2-205ENST00000427455 POTEMA6NI47 508 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 PFKMP08237 780 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 TMEM266Q2M3C6 531 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 MTHFD1LQ6UB35 978 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 RSPH3Q86UC2 560 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 NEK9Q8TD19 979 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 LXNQ9BS40 222 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 SEPT9Q9UHD8 586 aaPredicted RBP28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 PCDHA2Q9Y5H9 948 aa28.22■■■□□ 2.11
HERPUD2-205ENST00000427455 SCN5AQ14524 2016 aa28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 RESTQ13127 1097 aa28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 TRAF7Q6Q0C0 670 aa28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 RPUSD2Q8IZ73 545 aaKnown RBP28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 ZBTB10Q96DT7 871 aa28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 DYDC2Q96IM9 177 aa28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 EIF2AK1Q9BQI3 630 aaKnown RBP28.21■■■□□ 2.11
HERPUD2-205ENST00000427455 SMIM35A0A1B0GVV1 85 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 C22orf31O95567 290 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 PDIA4P13667 645 aaKnown RBP28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 KLRC1P26715 233 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 TECP42680 631 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 FXR2P51116 673 aaKnown RBP eCLIP28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 ZSWIM4Q9H7M6 989 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 RGL1Q9NZL6 768 aa28.2■■■□□ 2.1
HERPUD2-205ENST00000427455 RSPH10B2B2RC85 870 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 STBD1O95210 358 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 CTSHP09668 335 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 RSPH10BP0C881 870 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 ACRP10323 421 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 PRPHP41219 470 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 ATP2C1P98194 919 aaPredicted RBP28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 CYP4A11Q02928 519 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 C9orf50Q5SZB4 431 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 C16orf59Q7L2K0 433 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 C4orf19Q8IY42 314 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 DNAJB3Q8WWF6 145 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 HSD17B14Q9BPX1 270 aa28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 NIFKQ9BYG3 293 aaKnown RBP28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 FAM49AQ9H0Q0 323 aaPredicted RBP28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 WRAP73Q9P2S5 460 aaPredicted RBP28.19■■■□□ 2.1
HERPUD2-205ENST00000427455 BECN1Q14457 450 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 SHHQ15465 462 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 TMEM240Q5SV17 173 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 DEFB128Q7Z7B8 93 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 SPRYD3Q8NCJ5 442 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 VWCEQ96DN2 955 aa28.18■■■□□ 2.1
HERPUD2-205ENST00000427455 DDX11L8A8MPP1 907 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 MAGEB2O15479 319 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 SLITRK3O94933 977 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 BMP15O95972 392 aa28.17■■■□□ 2.1
HERPUD2-205ENST00000427455 CTTNQ14247 550 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms