RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 HDAC1Q13547 482 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 ACAP1Q15027 740 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 GJC2Q5T442 439 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 EXOC6Q8TAG9 804 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 OTUD7AQ8TE49 926 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 DYNLL2Q96FJ2 89 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 STRBPQ96SI9 672 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 TMEM39AQ9NV64 488 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 SWAP70Q9UH65 585 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 NAGPAQ9UK23 515 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 SOX13Q9UN79 622 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 TACC3Q9Y6A5 838 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 PLXNB2O15031 1838 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 KMT2BQ9UMN6 2715 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 CYP2D7A0A087X1C5 515 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 KBTBD13C9JR72 458 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 ENC1O14682 589 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 APPP05067 770 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 CLTBP09497 229 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 MX1P20591 662 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 GBP2P32456 591 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 CDK8P49336 464 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 USP14P54578 494 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 IRX3P78415 501 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 FAAP100Q0VG06 881 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 NFX1Q12986 1120 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 SEPT2Q15019 361 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 ZYXQ15942 572 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 C12orf60Q5U649 245 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 ZNF787Q6DD87 383 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 PSAPL1Q6NUJ1 521 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 SLCO4C1Q6ZQN7 724 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 VN1R5Q7Z5H4 357 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 PI4K2BQ8TCG2 481 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 APPBP2Q92624 585 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 LPAR1Q92633 364 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 ATOH1Q92858 354 aaPredicted RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 OSBP2Q969R2 916 aa7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
NIF3L1-207ENST00000426253 ZNF318Q5VUA4 2279 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 GBF1Q92538 1859 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 GSG1L2A8MUP6 293 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 MINDY4BA8MYZ0 360 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 FBXO24O75426 580 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 B3GALT4O96024 378 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 IGHDP01880 384 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 GUCY1A2P33402 732 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 EIF4A3P38919 411 aaKnown RBP7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 TLE2Q04725 743 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 PCDH1Q08174 1060 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 CCL14Q16627 93 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 RNFT1Q5M7Z0 435 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 GIMAP6Q6P9H5 292 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 CCDC174Q6PII3 467 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 CATSPERGQ6ZRH7 1159 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 PHC3Q8NDX5 983 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 ACER1Q8TDN7 264 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 SOCS4Q8WXH5 440 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 UBXN4Q92575 508 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 FERMT2Q96AC1 680 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 CCDC17Q96LX7 622 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 SEC62Q99442 399 aaKnown RBP7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 FEZ1Q99689 392 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 PRRX2Q99811 253 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 TRIM56Q9BRZ2 755 aaKnown RBP7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 SPON2Q9BUD6 331 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 KIAA1683Q9H0B3 1180 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 RBPJLQ9UBG7 517 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 MTCH2Q9Y6C9 303 aa7.33□□□□□ -1.24
NIF3L1-207ENST00000426253 DOCK1Q14185 1865 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 A0A1W2PRG0 241 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 M0R2C6 588 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 RFXAPO00287 272 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 GPAA1O43292 621 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 MSCO60682 206 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 CELA3AP09093 270 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 EPXP11678 715 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 GNAT2P19087 354 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 CDC27P30260 824 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 LIG3P49916 1009 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 PDE1AP54750 535 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 HERVK_113P62684 666 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 LMNB2Q03252 620 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 ARID5AQ03989 594 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 TCF15Q12870 199 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 PAK2Q13177 524 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
NIF3L1-207ENST00000426253 SBK1Q52WX2 424 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms