RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 UNC45AQ9H3U1 944 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 PHF24Q9UPV7 400 aa17.48■□□□□ 0.39
SHOX2-202ENST00000425436 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 TBX3O15119 743 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 SMC2O95347 1197 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 SLFN14P0C7P3 912 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 TCF7P36402 384 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 PSMC6P62333 389 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 PURAQ00577 322 aaKnown RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 MDM2Q00987 491 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 C11orf49Q9H6J7 331 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 DACH1Q9UI36 760 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 POSTNQ15063 836 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 NT5DC1Q5TFE4 455 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 DTHD1Q6ZMT9 781 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 C11orf57Q6ZUT1 292 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 NECAB2Q7Z6G3 386 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 TRIM50Q86XT4 487 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 IQUBQ8NA54 791 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
SHOX2-202ENST00000425436 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
SHOX2-202ENST00000425436 IKBKBO14920 756 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 KPNA6O60684 536 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 OR52Z1P0C646 297 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 COL6A1P12109 1028 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 CAPN2P17655 700 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 KRT76Q01546 638 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 GRIN1Q05586 938 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 ZNF746Q6NUN9 644 aaPredicted RBP17.46■□□□□ 0.39
SHOX2-202ENST00000425436 UBE2Q1Q7Z7E8 422 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 SLFN12Q8IYM2 578 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 KAT2BQ92831 832 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 GLT1D1Q96MS3 346 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 MTG1Q9BT17 334 aaPredicted RBP17.46■□□□□ 0.39
SHOX2-202ENST00000425436 TCEAL9Q9UHQ7 104 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
SHOX2-202ENST00000425436 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 EML1O00423 815 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 ATG7O95352 703 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 LGALS2P05162 132 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 HOXD8P13378 290 aaPredicted RBP17.45■□□□□ 0.38
SHOX2-202ENST00000425436 CDC25BP30305 580 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 TECP42680 631 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 SPECC1Q5M775 1068 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 SWSAP1Q6NVH7 229 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 SYMPKQ92797 1274 aaKnown RBP17.45■□□□□ 0.38
SHOX2-202ENST00000425436 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 AK8Q96MA6 479 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 PCYT2Q99447 389 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 TRIM5Q9C035 493 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 STARD7Q9NQZ5 370 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 DISC1Q9NRI5 854 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 SERTAD1Q9UHV2 236 aa17.45■□□□□ 0.38
SHOX2-202ENST00000425436 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 ACTN4O43707 911 aaKnown RBP17.44■□□□□ 0.38
SHOX2-202ENST00000425436 SUPT20HL2P0C7V6 817 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
SHOX2-202ENST00000425436 NCAPH2Q6IBW4 605 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 B3GNT9Q6UX72 402 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 DHX40Q8IX18 779 aaKnown RBP17.44■□□□□ 0.38
SHOX2-202ENST00000425436 MLKLQ8NB16 471 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 GLG1Q92896 1179 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 PCDHA5Q9Y5H7 936 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 WDR81Q562E7 1941 aa17.44■□□□□ 0.38
SHOX2-202ENST00000425436 H3BRB1 525 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 BACH1O14867 736 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 MARK3P27448 753 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 CLCN1P35523 988 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 ZNF75DP51815 510 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 SPIRE1Q08AE8 756 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 PPP2R5CQ13362 524 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 PNOCQ13519 176 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 ITGA7Q13683 1181 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 IL17AQ16552 155 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 NBPF20Q3BBV1 942 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 DPCR1Q3MIW9 517 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 SLC39A5Q6ZMH5 540 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
SHOX2-202ENST00000425436 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
SHOX2-202ENST00000425436 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
SHOX2-202ENST00000425436 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 TUT1Q9H6E5 874 aaKnown RBP17.43■□□□□ 0.38
SHOX2-202ENST00000425436 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
SHOX2-202ENST00000425436 POTEMA6NI47 508 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 WDR64B1ANS9 1081 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 LGR5O75473 907 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 CABYRO75952 493 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 F2P00734 622 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 PSAPP07602 524 aa17.42■□□□□ 0.38
SHOX2-202ENST00000425436 PSEN2P49810 448 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms