RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MRPL11Q9Y3B7 192 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 FRMD3A2A2Y4 597 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 TACC1O75410 805 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 EYA4O95677 639 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 HSD17B14Q9BPX1 270 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 CEP72Q9P209 647 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 SAMM50Q9Y512 469 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 PSMD10O75832 226 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 NR3C1P04150 777 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 CYP2J2P51589 502 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 SLC9C1Q4G0N8 1177 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
UBR4-207ENST00000425413 RANBP17Q9H2T7 1088 aaKnown RBP12.72□□□□□ -0.37
UBR4-207ENST00000425413 CCDC151A5D8V7 595 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 TMEM150BA6NC51 233 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 PIK3CDO00329 1044 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 IPO5O00410 1097 aaKnown RBP12.71□□□□□ -0.37
UBR4-207ENST00000425413 CYP3A4P08684 503 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 OAS2P29728 719 aaKnown RBP12.71□□□□□ -0.37
UBR4-207ENST00000425413 RNASE9P60153 205 aaKnown RBP12.71□□□□□ -0.37
UBR4-207ENST00000425413 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 TUBB2AQ13885 445 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
UBR4-207ENST00000425413 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 PSMD1Q99460 953 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 ASTN1O14525 1302 aa12.71□□□□□ -0.37
UBR4-207ENST00000425413 A0A087X0T9 212 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 GNA14O95837 355 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 FAM228BP0C875 321 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.38
UBR4-207ENST00000425413 CDK17Q00537 523 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.38
UBR4-207ENST00000425413 MCTP2Q6DN12 878 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.38
UBR4-207ENST00000425413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.383e-6■■■□□ 18.3
UBR4-207ENST00000425413 PACSIN2Q9UNF0 486 aaPredicted RBP12.71□□□□□ -0.38
UBR4-207ENST00000425413 FTCDO95954 541 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 ITGB5P18084 799 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 EIF2AK2P19525 551 aaKnown RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 PRELPP51888 382 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 BRD3Q15059 726 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 KCTD19Q17RG1 926 aaPredicted RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 LXNQ9BS40 222 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 POLR3CQ9BUI4 534 aaPredicted RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 GOLPH3Q9H4A6 298 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 PHACTR2O75167 634 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 ASNSP08243 561 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 TNNT3P45378 269 aaPredicted RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
UBR4-207ENST00000425413 EXOC3L4Q17RC7 722 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 PDE11AQ9HCR9 933 aa12.7□□□□□ -0.38
UBR4-207ENST00000425413 SORBS3O60504 671 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 FLOT1O75955 427 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 AFPP02771 609 aaKnown RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 ASIC2Q16515 512 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 MUM1L1Q5H9M0 696 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 SLC5A5Q92911 643 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 MS4A14Q96JA4 679 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 AJAP1Q9UKB5 411 aaPredicted RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 TISP43B9A030 160 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 H3BQF6 201 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TGFB1I1O43294 461 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 ERLIN1O75477 346 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 SERPING1P05155 500 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TRIM49P0CI25 452 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TRIM49CP0CI26 452 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 EPB41P11171 864 aaKnown RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 C1orf186Q6ZWK4 172 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 IQCDQ96DY2 449 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 TYW1Q9NV66 732 aaKnown RBP12.69□□□□□ -0.38
UBR4-207ENST00000425413 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 PDXKO00764 312 aa12.69□□□□□ -0.38
UBR4-207ENST00000425413 UCHL3P15374 230 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms