RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PTPN5P54829 565 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NHLH1Q02575 133 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KRT17Q04695 432 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZBTB33Q86T24 672 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RBM23Q86U06 439 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CKAP2LQ8IYA6 745 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MB21D2Q8IYB1 491 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MYL10Q9BUA6 226 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 LY9Q9HBG7 655 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SENP2Q9HC62 589 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KCNH7Q9NS40 1196 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MUTYHQ9UIF7 546 aa13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SPTBN5Q9NRC6 3674 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NCOR1O75376 2440 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 hCG_1984214I3L0E3 225 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 EYA4O95677 639 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ITGB1P05556 798 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KLRC1P26715 233 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TMOD1P28289 359 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 NAPAP54920 295 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ACTR2P61160 394 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 COASYQ13057 564 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MARCH8Q5T0T0 291 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MIS18BP1Q6P0N0 1132 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MTHFD1LQ6UB35 978 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TRIM67Q6ZTA4 783 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 HFE2Q6ZVN8 426 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SLC24A5Q71RS6 500 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ABI1Q8IZP0 508 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZNF713Q8N859 430 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PHF7Q9BWX1 381 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB3-203ENST00000425319 IGSF9BQ9UPX0 1349 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 KDM3AQ9Y4C1 1321 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ADCY7P51828 1080 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TMEM62Q0P6H9 643 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 UBE2SQ16763 222 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CEP55Q53EZ4 464 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 AGO3Q9H9G7 860 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TLR9Q9NR96 1032 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TMEM260Q9NX78 707 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MYH7BA7E2Y1 1941 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 COL4A6Q14031 1691 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SIP14410 1827 aa13.97□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CARNS1A5YM72 827 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TMEM221A6NGB7 291 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 M0R296 226 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 LAG3P18627 525 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ANTXR2P58335 489 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 FGD1P98174 961 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 AP3B2Q13367 1082 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RPGRIP1Q96KN7 1286 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 YTHDC1Q96MU7 727 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ADAM2Q99965 735 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RC3H2Q9HBD1 1191 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RIC8AQ9NPQ8 531 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 RGS18Q9NS28 235 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 TBC1D22BQ9NU19 505 aa13.96□□□□□ -0.17
HLA-DQB3-203ENST00000425319 BDP1A6H8Y1 2624 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CCDC196A0A1B0GTZ2 297 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SMCO2A6NFE2 343 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MAGEB2O15479 319 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 LINC01565O15544 149 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 TBX10O75333 385 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 GTF2F1P35269 517 aaKnown RBP eCLIP13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CRYBB1P53674 252 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 ZXDAP98168 799 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 CES5AQ6NT32 575 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
HLA-DQB3-203ENST00000425319 IL25Q9H293 177 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms