RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 UGCGQ16739 394 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 CEP63Q96MT8 703 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 IWS1Q96ST2 819 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 DBR1Q9UK59 544 aaKnown RBP29.31■■■□□ 2.28
LDB1-202ENST00000425280 ODF2LQ9ULJ1 636 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 ASTN1O14525 1302 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 RNF225M0QZC1 329 aaPredicted RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 GUCY2CP25092 1073 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 ZNF131P52739 623 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 TBC1D8BQ0IIM8 1120 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 BMT2Q1RMZ1 405 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 PPP4R3CPQ6ZMV5 832 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 FASTKD5Q7L8L6 764 aaKnown RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 ZC3H3Q8IXZ2 948 aaKnown RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 MYCT1Q8N699 235 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 SENP7Q9BQF6 1050 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 PARVGQ9HBI0 331 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 TCEAL9Q9UHQ7 104 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 PRPF6O94906 941 aaKnown RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 KNOP1Q1ED39 458 aaKnown RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 EDRF1Q3B7T1 1238 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 MAP1SQ66K74 1059 aaPredicted RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 ZNF746Q6NUN9 644 aaPredicted RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 NCAPG2Q86XI2 1143 aa29.3■■■□□ 2.28
LDB1-202ENST00000425280 MOV10L1Q9BXT6 1211 aaKnown RBP29.3■■■□□ 2.28
LDB1-202ENST00000425280 MAN2A1Q16706 1144 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 VWA3BQ502W6 1294 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 GPAT2Q6NUI2 795 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 PADI6Q6TGC4 694 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 RDM1Q8NG50 284 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 CCDC51Q96ER9 411 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 CDHR1Q96JP9 859 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 GCNT3O95395 438 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 C4orf19Q8IY42 314 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 SEL1LQ9UBV2 794 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 TRAF3IP3Q9Y228 551 aa29.29■■■□□ 2.28
LDB1-202ENST00000425280 SPATA31C2B4DYI2 1134 aa29.28■■■□□ 2.28
LDB1-202ENST00000425280 PSMC5P62195 406 aa29.28■■■□□ 2.28
LDB1-202ENST00000425280 GNPTABQ3T906 1256 aa29.28■■■□□ 2.28
LDB1-202ENST00000425280 PPP1R13BQ96KQ4 1090 aa29.28■■■□□ 2.28
LDB1-202ENST00000425280 NFASCO94856 1347 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 RARRES1P49788 294 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 FSTL1Q12841 308 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 MAPK7Q13164 816 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 SYCP1Q15431 976 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 STXBP2Q15833 593 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 NYAP1Q6ZVC0 841 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 SLC10A4Q96EP9 437 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 ERGIC2Q96RQ1 377 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 FIZ1Q96SL8 496 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 NDST4Q9H3R1 872 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 TXNRD2Q9NNW7 524 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 NMT1P30419 496 aaKnown RBP29.27■■■□□ 2.28
LDB1-202ENST00000425280 YWHABP31946 246 aaKnown RBP29.27■■■□□ 2.28
LDB1-202ENST00000425280 ALDH5A1P51649 535 aaPredicted RBP29.27■■■□□ 2.28
LDB1-202ENST00000425280 FKBP15Q5T1M5 1219 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 NAA15Q9BXJ9 866 aaKnown RBP29.27■■■□□ 2.28
LDB1-202ENST00000425280 ZNF408Q9H9D4 720 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 RBPJLQ9UBG7 517 aa29.27■■■□□ 2.28
LDB1-202ENST00000425280 EIF3DO15371 548 aaKnown RBP eCLIP29.26■■■□□ 2.27
LDB1-202ENST00000425280 HIP1RO75146 1068 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 OSBPP22059 807 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 FECHP22830 423 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 DAW1Q8N136 415 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 R3HDMLQ9H3Y0 253 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 ABHD10Q9NUJ1 306 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 PCDHA10Q9Y5I2 948 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 DOCK5Q9H7D0 1870 aa29.26■■■□□ 2.27
LDB1-202ENST00000425280 TTC26A0AVF1 554 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 PDXKO00764 312 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 TNNT1P13805 278 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 ERCC3P19447 782 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 ADAM9Q13443 819 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 SNAPC2Q13487 334 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 CCDC40Q4G0X9 1142 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 RASSF10A6NK89 507 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 EIF3JO75822 258 aaKnown RBP29.25■■■□□ 2.27
LDB1-202ENST00000425280 GNA14O95837 355 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 KLK7P49862 253 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 SMAP1Q8IYB5 467 aaPredicted RBP29.25■■■□□ 2.27
LDB1-202ENST00000425280 JPH1Q9HDC5 661 aaPredicted RBP29.25■■■□□ 2.27
LDB1-202ENST00000425280 MYH11P35749 1972 aa29.25■■■□□ 2.27
LDB1-202ENST00000425280 TMEM150BA6NC51 233 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 SOWAHBA6NEL2 793 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 POTEB2H3BUK9 544 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 SLC25A27O95847 323 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 KRT9P35527 623 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 MARSP56192 900 aaKnown RBP29.24■■■□□ 2.27
LDB1-202ENST00000425280 KCNA1Q09470 495 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 TYW1Q9NV66 732 aaKnown RBP29.24■■■□□ 2.27
LDB1-202ENST00000425280 CAPN11Q9UMQ6 739 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 WDR81Q562E7 1941 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 CALUO43852 315 aaPredicted RBP29.24■■■□□ 2.27
LDB1-202ENST00000425280 NR2F2P24468 414 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 PTPN14Q15678 1187 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 ODR4Q5SWX8 454 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 ZNF720Q7Z2F6 126 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 TTYH3Q9C0H2 523 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 SLC9A2Q9UBY0 812 aa29.24■■■□□ 2.27
LDB1-202ENST00000425280 TELO2Q9Y4R8 837 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms