RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PFKFB2O60825 505 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 RPLP2P05387 115 aaKnown RBP24.42■■□□□ 1.5
CDCP1-202ENST00000425231 HTRA4P83105 476 aaPredicted RBP24.42■■□□□ 1.5
CDCP1-202ENST00000425231 CCDC85BQ15834 202 aaPredicted RBP24.42■■□□□ 1.5
CDCP1-202ENST00000425231 BLIDQ8IZY5 108 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 DAGLBQ8NCG7 672 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 TBCKQ8TEA7 893 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 ATP8B4Q8TF62 1192 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 TOP1MTQ969P6 601 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 FAM49AQ9H0Q0 323 aaPredicted RBP24.42■■□□□ 1.5
CDCP1-202ENST00000425231 PRDM6Q9NQX0 595 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 INSL6Q9Y581 213 aa24.42■■□□□ 1.5
CDCP1-202ENST00000425231 MAFBQ9Y5Q3 323 aaPredicted RBP24.42■■□□□ 1.5
CDCP1-202ENST00000425231 MSH4O15457 936 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 HBP1O60381 514 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 AK2P54819 239 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 MRPS6P82932 125 aaKnown RBP24.41■■□□□ 1.5
CDCP1-202ENST00000425231 FBXO47Q5MNV8 452 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 GALNT17Q6IS24 598 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 PDXDC2PQ6P474 469 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 MTHFD1LQ6UB35 978 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 SMAP1Q8IYB5 467 aaPredicted RBP24.41■■□□□ 1.5
CDCP1-202ENST00000425231 C22orf23Q9BZE7 217 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 MTCH2Q9Y6C9 303 aa24.41■■□□□ 1.5
CDCP1-202ENST00000425231 SMIM35A0A1B0GVV1 85 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 LINC01553A4QN01 128 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 SEC24BO95487 1268 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 KRT76Q01546 638 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 IER5Q5VY09 327 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 COL25A1Q9BXS0 654 aaPredicted RBP24.4■■□□□ 1.5
CDCP1-202ENST00000425231 PCDHA10Q9Y5I2 948 aa24.4■■□□□ 1.5
CDCP1-202ENST00000425231 ZBTB42B2RXF5 422 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 LPXNO60711 386 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 DTNBO60941 627 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 CDKL5O76039 1030 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 CTDNEP1O95476 244 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 KLRC1P26715 233 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 ANKRD1Q15327 319 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 AGO3Q9H9G7 860 aaKnown RBP24.39■■□□□ 1.5
CDCP1-202ENST00000425231 KCNJ14Q9UNX9 436 aa24.39■■□□□ 1.5
CDCP1-202ENST00000425231 MYH9P35579 1960 aaKnown RBP24.39■■□□□ 1.49
CDCP1-202ENST00000425231 PRRC2BQ5JSZ5 2229 aaKnown RBP24.38■■□□□ 1.49
CDCP1-202ENST00000425231 STK36Q9NRP7 1315 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 CYP3A7-CYP3A51PA0A087WV96 503 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 PSAPP07602 524 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 CYP3A7P24462 503 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 ERVK-21P61565 698 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 TSHZ1Q6ZSZ6 1077 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 NME8Q8N427 588 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 SP7Q8TDD2 431 aaPredicted RBP24.38■■□□□ 1.49
CDCP1-202ENST00000425231 SLC5A5Q92911 643 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 TGS1Q96RS0 853 aaKnown RBP24.38■■□□□ 1.49
CDCP1-202ENST00000425231 RIT2Q99578 217 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 PHF20Q9BVI0 1012 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 SQORQ9Y6N5 450 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 COL1A2P08123 1366 aa24.38■■□□□ 1.49
CDCP1-202ENST00000425231 UPP2O95045 317 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 TMEM62Q0P6H9 643 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 GRB10Q13322 594 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 Q4G0T1 1027 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 ZNF484Q5JVG2 852 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 KRT40Q6A162 431 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 BBXQ8WY36 941 aaPredicted RBP24.37■■□□□ 1.49
CDCP1-202ENST00000425231 SUGCTQ9HAC7 445 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 TRPV2Q9Y5S1 764 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 WDR81Q562E7 1941 aa24.37■■□□□ 1.49
CDCP1-202ENST00000425231 ENPP3O14638 875 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
CDCP1-202ENST00000425231 CKAP2LQ8IYA6 745 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 GJA10Q969M2 543 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 MBOAT7Q96N66 472 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 CELF4Q9BZC1 486 aaKnown RBP24.36■■□□□ 1.49
CDCP1-202ENST00000425231 GJB4Q9NTQ9 266 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 GABBR1Q9UBS5 961 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 TCEAL9Q9UHQ7 104 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 SAMM50Q9Y512 469 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 KDM3AQ9Y4C1 1321 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 LOXHD1Q8IVV2 1947 aa24.36■■□□□ 1.49
CDCP1-202ENST00000425231 WDR64B1ANS9 1081 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 GTPBP6O43824 516 aaPredicted RBP24.35■■□□□ 1.49
CDCP1-202ENST00000425231 TDP2O95551 362 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 CD52P31358 61 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 ME3Q16798 604 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 KIAA0319LQ8IZA0 1049 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 MICALL1Q8N3F8 863 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 DISC1Q9NRI5 854 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 MTUS1Q9ULD2 1270 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 IGSF9BQ9UPX0 1349 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 EVPLQ92817 2033 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 CUL9Q8IWT3 2517 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 XIRP2A4UGR9 3374 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 M0QZ92 97 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 GAS7O60861 476 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 PSMD10O75832 226 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 LARGE1O95461 756 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 NONOQ15233 471 aaKnown RBP eCLIP24.35■■□□□ 1.49
CDCP1-202ENST00000425231 LRCH2Q5VUJ6 765 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 MOXD1Q6UVY6 613 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 KRT25Q7Z3Z0 450 aa24.35■■□□□ 1.49
CDCP1-202ENST00000425231 NECAB1Q8N987 351 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms