RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 DBF4BQ8NFT6 615 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 TIFAQ96CG3 184 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 FAM161BQ96MY7 647 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 TBC1D32Q96NH3 1257 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 SLC9A7Q96T83 725 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 KCNMB3Q9NPA1 279 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 DISC1Q9NRI5 854 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 DDX25Q9UHL0 483 aaKnown RBP20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 YBX2Q9Y2T7 364 aaKnown RBP20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 PCDHA2Q9Y5H9 948 aa20.24■□□□□ 0.83
IGHV3-47-201ENST00000425060 ABHD14A-ACY1A0A1B0GW23 586 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 BTBD18B2RXH4 712 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 GCFC2P16383 781 aaKnown RBP20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 RABGGTBP53611 331 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 WDR5P61964 334 aaKnown RBP20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 RAB30Q15771 203 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 DNAJB3Q8WWF6 145 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 IGSF9BQ9UPX0 1349 aa20.23■□□□□ 0.83
IGHV3-47-201ENST00000425060 WDR81Q562E7 1941 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 ZNF862O60290 1169 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 SFNP31947 248 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 ZNF484Q5JVG2 852 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 RDM1Q8NG50 284 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 BBXQ8WY36 941 aaPredicted RBP20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 ZNF576Q9H609 170 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 TCEAL9Q9UHQ7 104 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 SAMM50Q9Y512 469 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 PCDHA11Q9Y5I1 949 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 GBF1Q92538 1859 aa20.22■□□□□ 0.83
IGHV3-47-201ENST00000425060 COL1A2P08123 1366 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 SMIM35A0A1B0GVV1 85 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 RPLP2P05387 115 aaKnown RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 KLRC1P26715 233 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 JAK3P52333 1124 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 FOSBP53539 338 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 IKBKEQ14164 716 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 RSPH3Q86UC2 560 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 HAS1Q92839 578 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 FAM20AQ96MK3 541 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 NAP1L4Q99733 375 aaKnown RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 STXBP5LQ9Y2K9 1186 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 MYH9P35579 1960 aaKnown RBP20.21■□□□□ 0.83
IGHV3-47-201ENST00000425060 TBX3O15119 743 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 CHMP2AO43633 222 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 EFCAB14O75071 495 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 CD2BP2O95400 341 aaKnown RBP20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 MYOGP15173 224 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 DEFB103AP81534 67 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 TRIM29Q14134 588 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 GRIN2CQ14957 1233 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 UGCGQ16739 394 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 NKX2-4Q9H2Z4 354 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 VAV3Q9UKW4 847 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 CDY2AQ9Y6F7 541 aa20.2■□□□□ 0.82
IGHV3-47-201ENST00000425060 CHD9Q3L8U1 2897 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 SIP14410 1827 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 WNT7AO00755 349 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 ST18O60284 1047 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 STBD1O95210 358 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 KCNJ6P48051 423 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 MRPS6P82932 125 aaKnown RBP20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 PPP2R5CQ13362 524 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 MIER3Q7Z3K6 550 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 CKAP2LQ8IYA6 745 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 KIAA0319LQ8IZA0 1049 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 NME8Q8N427 588 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 FBXO18Q8NFZ0 1043 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 SEPT8Q92599 483 aa20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
IGHV3-47-201ENST00000425060 EML1O00423 815 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 C22orf31O95567 290 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 GUCY1B3Q02153 619 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 LPIN1Q14693 890 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 FBXO47Q5MNV8 452 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 C8orf76Q96K31 380 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 FAM167AQ96KS9 214 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 BACH2Q9BYV9 841 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 SQORQ9Y6N5 450 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 KDM3AQ9Y4C1 1321 aa20.18■□□□□ 0.82
IGHV3-47-201ENST00000425060 OATP04181 439 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 GHRP10912 638 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 PRKCEQ02156 737 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 IER5Q5VY09 327 aa20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 TMCO2Q7Z6W1 182 aaPredicted RBP20.17■□□□□ 0.82
IGHV3-47-201ENST00000425060 LINC01465Q8N7H1 131 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms