RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 ACTR2P61160 394 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 SMAD4Q13485 552 aaKnown RBP13.43□□□□□ -0.26
PLOD3-204ENST00000424135 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 CDHR1Q96JP9 859 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 PHOX2BQ99453 314 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 MXRA8Q9BRK3 442 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 SLC9A2Q9UBY0 812 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 CD207Q9UJ71 328 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 TRPV2Q9Y5S1 764 aa13.43□□□□□ -0.26
PLOD3-204ENST00000424135 IGSF9BQ9UPX0 1349 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 SPDYE3A6NKU9 549 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 STXBP3O00186 592 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 NCK2O43639 380 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 MCM5P33992 734 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 LIFRP42702 1097 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 MRE11P49959 708 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 GNAQP50148 359 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 FUT2Q10981 343 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 RBM23Q86U06 439 aaKnown RBP13.42□□□□□ -0.26
PLOD3-204ENST00000424135 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 MICU3Q86XE3 530 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 CMTR2Q8IYT2 770 aaKnown RBP13.42□□□□□ -0.26
PLOD3-204ENST00000424135 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 VN1R2Q8NFZ6 395 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 POF1BQ8WVV4 589 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 TMEM40Q8WWA1 233 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 PLVAPQ9BX97 442 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 CELF4Q9BZC1 486 aaKnown RBP13.42□□□□□ -0.26
PLOD3-204ENST00000424135 AGO4Q9HCK5 861 aaKnown RBP13.42□□□□□ -0.26
PLOD3-204ENST00000424135 BARX2Q9UMQ3 279 aaPredicted RBP13.42□□□□□ -0.26
PLOD3-204ENST00000424135 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
PLOD3-204ENST00000424135 CNTNAP5Q8WYK1 1306 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
PLOD3-204ENST00000424135 PER2O15055 1255 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 EYA4O95677 639 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 SCG2P13521 617 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 NRIP1P48552 1158 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 NDUFV1P49821 464 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 PAK2Q13177 524 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 HERC4Q5GLZ8 1057 aaPredicted RBP13.41□□□□□ -0.26
PLOD3-204ENST00000424135 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 IER5LQ5T953 404 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 IER5Q5VY09 327 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 CREB3L3Q68CJ9 461 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 P2RX5Q93086 422 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 GINS2Q9Y248 185 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
PLOD3-204ENST00000424135 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
PLOD3-204ENST00000424135 ZBTB42B2RXF5 422 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 ATP4AP20648 1035 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 STAT5BP51692 787 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 NFX1Q12986 1120 aaKnown RBP13.4□□□□□ -0.26
PLOD3-204ENST00000424135 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 KIAA0319LQ8IZA0 1049 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 EFHBQ8N7U6 833 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
PLOD3-204ENST00000424135 NFASCO94856 1347 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 IGKV6D-21A0A0A0MT36 114 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 SMIM35A0A1B0GVV1 85 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 MEIS1O00470 390 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 MAFGO15525 162 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 ATG7O95352 703 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 KLRC1P26715 233 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 ERVFC1P60507 584 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 KRT76Q01546 638 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 CEP55Q53EZ4 464 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 SGMS1Q86VZ5 419 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 CCDC60Q8IWA6 550 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-204ENST00000424135 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 PRSS33Q8NF86 280 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 EDAQ92838 391 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 ANO3Q9BYT9 981 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 FAM217BQ9NTX9 383 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-204ENST00000424135 USP15Q9Y4E8 981 aaPredicted RBP13.39□□□□□ -0.27
PLOD3-204ENST00000424135 PLXNA4Q9HCM2 1894 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
PLOD3-204ENST00000424135 LOC730098B7Z3J9 87 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms