RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 NYXQ9GZU5 481 aa7.22□□□□□ -1.25
LINC00458-201ENST00000423442 CNNM2Q9H8M5 875 aa7.22□□□□□ -1.25
LINC00458-201ENST00000423442 NIP7Q9Y221 180 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC00458-201ENST00000423442 PDE4DIPQ5VU43 2346 aa7.22□□□□□ -1.25
LINC00458-201ENST00000423442 SCN7AQ01118 1682 aa7.22□□□□□ -1.25
LINC00458-201ENST00000423442 CHL1O00533 1208 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 GREM1O60565 184 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 CAMTA2O94983 1202 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 IARSP41252 1262 aaKnown RBP7.21□□□□□ -1.26
LINC00458-201ENST00000423442 SOX10P56693 466 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 RAD51AP2Q09MP3 1159 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 LAPTM5Q13571 262 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 ERMP1Q7Z2K6 904 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 PPP1R42Q7Z4L9 355 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 SP8Q8IXZ3 490 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 TMEM192Q8IY95 271 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 GPC2Q8N158 579 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 TP53I13Q8NBR0 393 aaPredicted RBP7.21□□□□□ -1.26
LINC00458-201ENST00000423442 NUP43Q8NFH3 380 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 TMX4Q9H1E5 349 aaPredicted RBP7.21□□□□□ -1.26
LINC00458-201ENST00000423442 ANTXR1Q9H6X2 564 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 KCNQ5Q9NR82 932 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 GFOD1Q9NXC2 390 aa7.21□□□□□ -1.26
LINC00458-201ENST00000423442 CA12O43570 354 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
LINC00458-201ENST00000423442 NPR1P16066 1061 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 ALDH1B1P30837 517 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 EIF4A3P38919 411 aaKnown RBP7.2□□□□□ -1.26
LINC00458-201ENST00000423442 EPS15P42566 896 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 AIMP1Q12904 312 aaKnown RBP7.2□□□□□ -1.26
LINC00458-201ENST00000423442 RPTNQ6XPR3 784 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 NLRC3Q7RTR2 1065 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 SYNE4Q8N205 404 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 LINC01356Q8N9X3 169 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 TNFRSF12AQ9NP84 129 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
LINC00458-201ENST00000423442 DBF4Q9UBU7 674 aaPredicted RBP7.2□□□□□ -1.26
LINC00458-201ENST00000423442 SUPT16HQ9Y5B9 1047 aaKnown RBP7.2□□□□□ -1.26
LINC00458-201ENST00000423442 ZNF205O95201 554 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 HOXB7P09629 217 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 BMP8BP34820 402 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 CLCQ05315 142 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 CRTC3Q6UUV7 619 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 SAPCD2Q86UD0 394 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 RTKN2Q8IZC4 609 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 FAM9BQ8IZU0 186 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 JMJD8Q96S16 334 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 MKRN2Q9H000 416 aaKnown RBP7.19□□□□□ -1.26
LINC00458-201ENST00000423442 EHMT1Q9H9B1 1298 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 LUC7LQ9NQ29 371 aaKnown RBP7.19□□□□□ -1.26
LINC00458-201ENST00000423442 HYPKQ9NX55 129 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 IMPACTQ9P2X3 320 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 ACSL6Q9UKU0 697 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 NUP98P52948 1817 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 MAP3K15Q6ZN16 1313 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 COL4A5P29400 1685 aa7.19□□□□□ -1.26
LINC00458-201ENST00000423442 A0A1W2PQ45 241 aaPredicted RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 A0A1W2PQY0 241 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 ELL2O00472 640 aaPredicted RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 CELF2O95319 508 aaKnown RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 VAV1P15498 845 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 EIF6P56537 245 aaKnown RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 TMEM62Q0P6H9 643 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 HLFQ16534 295 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 PARP10Q53GL7 1025 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 HSP90AB3PQ58FF7 597 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 GK5Q6ZS86 529 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 USP50Q70EL3 339 aaPredicted RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 COPS6Q7L5N1 327 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 ZNF296Q8WUU4 475 aaPredicted RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 JDP2Q8WYK2 163 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 RPGRQ92834 1020 aaKnown RBP7.18□□□□□ -1.26
LINC00458-201ENST00000423442 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 SLC6A18Q96N87 628 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 IFT57Q9NWB7 429 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 BCORQ6W2J9 1755 aa7.18□□□□□ -1.26
LINC00458-201ENST00000423442 KLRG2A4D1S0 409 aaPredicted RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 FFAR3O14843 346 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 DDX58O95786 925 aaKnown RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 HSP90B1P14625 803 aaKnown RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 GPTP24298 496 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 CCNFP41002 786 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 LIMS1P48059 325 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 PLEKHN1Q494U1 663 aaPredicted RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 CCDC30Q5VVM6 783 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 RBM17Q96I25 401 aaKnown RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 UTP14AQ9BVJ6 771 aaKnown RBP7.17□□□□□ -1.26
LINC00458-201ENST00000423442 STK31Q9BXU1 1019 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 PCDHB12Q9Y5F1 795 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 SNED1Q8TER0 1413 aa7.17□□□□□ -1.26
LINC00458-201ENST00000423442 KDM3BQ7LBC6 1761 aa7.16□□□□□ -1.26
LINC00458-201ENST00000423442 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
LINC00458-201ENST00000423442 MSL3P1P0C860 447 aa7.16□□□□□ -1.26
LINC00458-201ENST00000423442 NME1P15531 152 aaKnown RBP7.16□□□□□ -1.26
LINC00458-201ENST00000423442 ZNF200P98182 395 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms