RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 NAP1L2Q9ULW6 460 aaPredicted RBP9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
TRIM43CP-201ENST00000422468 LCHNA4D1U4 455 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SCG2P13521 617 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SREBF1P36956 1147 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 AK2P54819 239 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CCT2P78371 535 aaKnown RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 AP3B2Q13367 1082 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CCDC85BQ15834 202 aaPredicted RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CEP55Q53EZ4 464 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 FAM26DQ5JW98 314 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 TMCO2Q7Z6W1 182 aaPredicted RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 RPAINQ86UA6 219 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 DBF4BQ8NFT6 615 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CYP2W1Q8TAV3 490 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 ATXN2LQ8WWM7 1075 aaKnown RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 ARNTL2Q8WYA1 636 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SEPT8Q92599 483 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 GLG1Q92896 1179 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 ANO3Q9BYT9 981 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 CERS4Q9HA82 394 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 JPH1Q9HDC5 661 aaPredicted RBP9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 PRDM6Q9NQX0 595 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 SLC9A2Q9UBY0 812 aa9.34□□□□□ -0.91
TRIM43CP-201ENST00000422468 MYH9P35579 1960 aaKnown RBP9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 NFASCO94856 1347 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 EPOPA6NHQ4 379 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 RFXAPO00287 272 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 MEIS1O00470 390 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 AMHP03971 560 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 CTSHP09668 335 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 ARP10275 920 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 MARK3P27448 753 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 PSMA5P28066 241 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 SCRN1Q12765 414 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 PPFIA1Q13136 1202 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 ME3Q16798 604 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 MCTP2Q6DN12 878 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 TAF2Q6P1X5 1199 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 NIPA1Q7RTP0 329 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 NECAB1Q8N987 351 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 RASGRP4Q8TDF6 673 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 CCDC12Q8WUD4 166 aaPredicted RBP9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 AGO4Q9HCK5 861 aaKnown RBP9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 TUBE1Q9UJT0 475 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 INSL6Q9Y581 213 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 MTCH2Q9Y6C9 303 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 NLRC5Q86WI3 1866 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 MUC3AQ02505 3323 aa9.33□□□□□ -0.92
TRIM43CP-201ENST00000422468 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ESYT2A0FGR8 921 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 MBLAC1A4D2B0 266 aaPredicted RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 RRN3P2A6NIE6 340 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 M0R2N6 131 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 WNT7AO00755 349 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 PRPF3O43395 683 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 CHRNA1P02708 482 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 RPLP2P05387 115 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 CYP3A4P08684 503 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ZNF76P36508 570 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ACTR2P61160 394 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ERVK-21P61565 698 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 MRPS5P82675 430 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 HTRA4P83105 476 aaPredicted RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 GRB10Q13322 594 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ITGB3BPQ13352 177 aaPredicted RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 GRIK4Q16099 956 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 MARCH8Q5T0T0 291 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 L1TD1Q5T7N2 865 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 JAKMIP3Q5VZ66 844 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 PLPPR4Q7Z2D5 763 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 SPRED2Q7Z698 418 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 RSPH3Q86UC2 560 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 MICALL1Q8N3F8 863 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 DDX12PQ92771 950 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 APBB2Q92870 758 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 TNPO1Q92973 898 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ASB2Q96Q27 587 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 TGS1Q96RS0 853 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 PCYT2Q99447 389 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 IFIH1Q9BYX4 1025 aaKnown RBP9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 OSBPL7Q9BZF2 842 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 ZMYND12Q9H0C1 365 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 AZI2Q9H6S1 392 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 C6orf50Q9HD87 102 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 EVPLQ92817 2033 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 NCOR1O75376 2440 aa9.32□□□□□ -0.92
TRIM43CP-201ENST00000422468 LINC01553A4QN01 128 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms