RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 ADCY7P51828 1080 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 RCAN1P53805 252 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 ZP2Q05996 745 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 BTG3Q14201 252 aaPredicted RBP21.27■■□□□ 1
AC004540.1-203ENST00000421862 TSGA10IPQ3SY00 556 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 RNF20Q5VTR2 975 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 NPAS4Q8IUM7 802 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 CMTR2Q8IYT2 770 aaKnown RBP21.27■■□□□ 1
AC004540.1-203ENST00000421862 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
AC004540.1-203ENST00000421862 P2RX5Q93086 422 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 PGBD1Q96JS3 809 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 NEK1Q96PY6 1258 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 BARHL2Q9NY43 387 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 TRPC6Q9Y210 931 aa21.27■■□□□ 1
AC004540.1-203ENST00000421862 MUC6Q6W4X9 2439 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 SMIM35A0A1B0GVV1 85 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 POTEB3A0JP26 581 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 MEIS1O00470 390 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 SLC26A2P50443 739 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 STAT5BP51692 787 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 HYAL1Q12794 435 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 RTN1Q16799 776 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 POTEBQ6S5H4 581 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 NIPA1Q7RTP0 329 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 RTN4RL1Q86UN2 441 aaPredicted RBP21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 TRAPPC12Q8WVT3 735 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 CRYGNQ8WXF5 182 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 CLDND1Q9NY35 253 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 MRPL42Q9Y6G3 142 aaKnown RBP21.26■□□□□ 0.99
AC004540.1-203ENST00000421862 NID2Q14112 1375 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 ZNF318Q5VUA4 2279 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 C19orf67A6NJJ6 358 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 PRR33A8MZF0 331 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 M0QZ92 97 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 ZBTB43O43298 467 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 SSTR3P32745 418 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 CAMK1Q14012 370 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 FAM43BQ6ZT52 329 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 DHX32Q7L7V1 743 aaKnown RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 CELF4Q9BZC1 486 aaKnown RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 GLT8D2Q9H1C3 349 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 FAM217BQ9NTX9 383 aaPredicted RBP21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 PADI3Q9ULW8 664 aa21.25■□□□□ 0.99
AC004540.1-203ENST00000421862 COL1A2P08123 1366 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 TBX10O75333 385 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 CCNE2O96020 404 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 PAK2Q13177 524 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 ADCK5Q3MIX3 580 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 NAALADL2Q58DX5 795 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 MTHFD1LQ6UB35 978 aa21.24■□□□□ 0.99
AC004540.1-203ENST00000421862 IGLV3-22A0A075B6J6 115 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 SCG2P13521 617 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 ALADP13716 330 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 TMEM62Q0P6H9 643 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 SMAD2Q15796 467 aaKnown RBP21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 ABHD15Q6UXT9 468 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 CCDC60Q8IWA6 550 aaPredicted RBP21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 ADHFE1Q8IWW8 467 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 RASEFQ8IZ41 740 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 NME8Q8N427 588 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 TMX1Q9H3N1 280 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 TMEM260Q9NX78 707 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 PLAGL2Q9UPG8 496 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 TRIOO75962 3097 aa21.23■□□□□ 0.99
AC004540.1-203ENST00000421862 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 GOLGA8AA7E2F4 631 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 GOLGA8BA8MQT2 603 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 FAM86B1E9PN63 330 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 FAM86B2P0C5J1 330 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 CDC27P30260 824 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 DLX2Q07687 328 aaPredicted RBP21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 ATP8B4Q8TF62 1192 aa21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
AC004540.1-203ENST00000421862 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 ESYT2A0FGR8 921 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 ZBTB42B2RXF5 422 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 DHX15O43143 795 aaKnown RBP21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 MBTPS2O43462 519 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 DCXO43602 365 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 HBP1O60381 514 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 ITGB1P05556 798 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 CYP3A4P08684 503 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 STAG3L1P0CL83 205 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 DNAJB1P25685 340 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 KRT76Q01546 638 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 ERVK-5Q9HDB9 667 aa21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 ALG13Q9NP73 1137 aaKnown RBP21.21■□□□□ 0.99
AC004540.1-203ENST00000421862 GTF2F1P35269 517 aaKnown RBP eCLIP21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 SMAD4Q13485 552 aaKnown RBP21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 KRT32Q14532 448 aa21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 FAM160B1Q5W0V3 765 aa21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 SPPL3Q8TCT6 385 aa21.2■□□□□ 0.98
AC004540.1-203ENST00000421862 TMEM40Q8WWA1 233 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms