RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 A0A1W2PQ27 194 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
CAST-208ENST00000421689 A0A1W2PQ64 194 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 A0A1W2PQD8 194 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 OATP04181 439 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAST-208ENST00000421689 ATP4AP20648 1035 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 CMA1P23946 247 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 MARK3P27448 753 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 PRKCEQ02156 737 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 XKR3Q5GH77 459 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 HYIQ5T013 277 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 RASSF8Q8NHQ8 419 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
CAST-208ENST00000421689 SEZ6LQ9BYH1 1024 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 RNPEPQ9H4A4 650 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
CAST-208ENST00000421689 WRAP73Q9P2S5 460 aaPredicted RBP13.2□□□□□ -0.3
CAST-208ENST00000421689 KAT6AQ92794 2004 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 ZNF862O60290 1169 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 HBP1O60381 514 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 EN2P19622 333 aaPredicted RBP13.19□□□□□ -0.3
CAST-208ENST00000421689 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 PSMC6P62333 389 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 GRB10Q13322 594 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
CAST-208ENST00000421689 ECM1Q16610 540 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 OTUD6AQ7L8S5 288 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 NACC1Q96RE7 527 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 NIFKQ9BYG3 293 aaKnown RBP13.19□□□□□ -0.3
CAST-208ENST00000421689 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
CAST-208ENST00000421689 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
CAST-208ENST00000421689 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 STBD1O95210 358 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 COL6A1P12109 1028 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 YWHABP31946 246 aaKnown RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 TMEM119Q4V9L6 283 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 PAWRQ96IZ0 340 aaKnown RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 C11orf49Q9H6J7 331 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 ANKEF1Q9NU02 776 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
CAST-208ENST00000421689 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
CAST-208ENST00000421689 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 RRN3P2A6NIE6 340 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
CAST-208ENST00000421689 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 SMIM10L2BP0DMW5 78 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 INSRRP14616 1297 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 PPFIA1Q13136 1202 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 ANO5Q75V66 913 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 SESTD1Q86VW0 696 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
CAST-208ENST00000421689 PLIN2Q99541 437 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 PYM1Q9BRP8 204 aaKnown RBP13.17□□□□□ -0.3
CAST-208ENST00000421689 PANK2Q9BZ23 570 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
CAST-208ENST00000421689 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 ARID2Q68CP9 1835 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 COL1A2P08123 1366 aa13.17□□□□□ -0.3
CAST-208ENST00000421689 NRCAMQ92823 1304 aa13.16□□□□□ -0.3
CAST-208ENST00000421689 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
CAST-208ENST00000421689 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
CAST-208ENST00000421689 E9PMD0 336 aa13.16□□□□□ -0.3
CAST-208ENST00000421689 ARVCFO00192 962 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms