RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 PCDHA2Q9Y5H9 948 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 TRPV2Q9Y5S1 764 aa23.19■■□□□ 1.3
MCF2L-212ENST00000420013 KDM3AQ9Y4C1 1321 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 KIAA1671Q9BY89 1806 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 IGLV3-22A0A075B6J6 115 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 SMIM35A0A1B0GVV1 85 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 POTEB3A0JP26 581 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 PRPF3O43395 683 aaKnown RBP23.18■■□□□ 1.3
MCF2L-212ENST00000420013 CPA1P15085 419 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 AKAP17AQ02040 695 aaKnown RBP23.18■■□□□ 1.3
MCF2L-212ENST00000420013 POTEBQ6S5H4 581 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 PLA2G4DQ86XP0 818 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 BICD2Q8TD16 824 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 RC3H2Q9HBD1 1191 aaKnown RBP23.18■■□□□ 1.3
MCF2L-212ENST00000420013 TCEAL9Q9UHQ7 104 aa23.18■■□□□ 1.3
MCF2L-212ENST00000420013 IGSF9BQ9UPX0 1349 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 FAM86B1E9PN63 330 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 H3BNC9 293 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 HBP1O60381 514 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 FAM86B2P0C5J1 330 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 TMEM192Q8IY95 271 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 FIBCD1Q8N539 461 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 IL17RAQ96F46 866 aa23.17■■□□□ 1.3
MCF2L-212ENST00000420013 FAM49AQ9H0Q0 323 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-212ENST00000420013 UBE2ZQ9H832 354 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-212ENST00000420013 EVPLQ92817 2033 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 IPO5O00410 1097 aaKnown RBP23.16■■□□□ 1.3
MCF2L-212ENST00000420013 PKN1Q16512 942 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 ABHD15Q6UXT9 468 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 NME8Q8N427 588 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 ATP8B4Q8TF62 1192 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 TBC1D22BQ9NU19 505 aa23.16■■□□□ 1.3
MCF2L-212ENST00000420013 C5orf67F2Z3F1 127 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 BACH1O14867 736 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 CCNE2O96020 404 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 RB1P06400 928 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 IFNAR1P17181 557 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 EVCP57679 992 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 GPM6BQ13491 265 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 ZNF746Q6NUN9 644 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-212ENST00000420013 MIS18BP1Q6P0N0 1132 aa23.15■■□□□ 1.3
MCF2L-212ENST00000420013 CCDC60Q8IWA6 550 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-212ENST00000420013 SMAP1Q8IYB5 467 aaPredicted RBP23.15■■□□□ 1.3
MCF2L-212ENST00000420013 KRT76Q01546 638 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 NTRK3Q16288 839 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 MTHFD1LQ6UB35 978 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 TRAPPC12Q8WVT3 735 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 CLP1Q92989 425 aaKnown RBP23.14■■□□□ 1.29
MCF2L-212ENST00000420013 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 C11orf84Q9BUA3 381 aaPredicted RBP23.14■■□□□ 1.29
MCF2L-212ENST00000420013 LMAN2LQ9H0V9 348 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 AGO3Q9H9G7 860 aaKnown RBP23.14■■□□□ 1.29
MCF2L-212ENST00000420013 ZNF302Q9NR11 478 aa23.14■■□□□ 1.29
MCF2L-212ENST00000420013 DDX39AO00148 427 aaKnown RBP23.13■■□□□ 1.29
MCF2L-212ENST00000420013 ENPP3O14638 875 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 DHX15O43143 795 aaKnown RBP23.13■■□□□ 1.29
MCF2L-212ENST00000420013 CD52P31358 61 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 CIITAP33076 1130 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 CTNNB1P35222 781 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 PAK2Q13177 524 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 ZNF484Q5JVG2 852 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 PDXDC2PQ6P474 469 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 NPAS4Q8IUM7 802 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 LINC01599Q8WXQ3 324 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 PHKBQ93100 1093 aa23.13■■□□□ 1.29
MCF2L-212ENST00000420013 ZNF689Q96CS4 500 aaPredicted RBP23.13■■□□□ 1.29
MCF2L-212ENST00000420013 CELF4Q9BZC1 486 aaKnown RBP23.13■■□□□ 1.29
MCF2L-212ENST00000420013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-212ENST00000420013 RBAK-RBAKDNI3L0D1 243 aa23.12■■□□□ 1.29
MCF2L-212ENST00000420013 ODR4Q5SWX8 454 aa23.12■■□□□ 1.29
MCF2L-212ENST00000420013 ZBTB10Q96DT7 871 aa23.12■■□□□ 1.29
MCF2L-212ENST00000420013 NECAB3Q96P71 396 aaPredicted RBP23.12■■□□□ 1.29
MCF2L-212ENST00000420013 NSUN3Q9H649 340 aaKnown RBP23.12■■□□□ 1.29
MCF2L-212ENST00000420013 SH3GLB2Q9NR46 395 aa23.12■■□□□ 1.29
MCF2L-212ENST00000420013 LINC00271P0C7V0 271 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 STAG3L1P0CL83 205 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 LEXMQ3ZCV2 418 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 RUFY3Q7L099 469 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 CMTR2Q8IYT2 770 aaKnown RBP23.11■■□□□ 1.29
MCF2L-212ENST00000420013 FAM177A1Q8N128 213 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-212ENST00000420013 BANK1Q8NDB2 785 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 FAM167AQ96KS9 214 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 PLVAPQ9BX97 442 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 SLC26A6Q9BXS9 759 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 C22orf23Q9BZE7 217 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 RNF216Q9NWF9 866 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-212ENST00000420013 PADI3Q9ULW8 664 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 CEP131Q9UPN4 1083 aa23.11■■□□□ 1.29
MCF2L-212ENST00000420013 DGKIO75912 1065 aa23.1■■□□□ 1.29
MCF2L-212ENST00000420013 KLRC1P26715 233 aa23.1■■□□□ 1.29
MCF2L-212ENST00000420013 PDIA3P30101 505 aaKnown RBP23.1■■□□□ 1.29
MCF2L-212ENST00000420013 BTG3Q14201 252 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-212ENST00000420013 TRIM22Q8IYM9 498 aa23.1■■□□□ 1.29
MCF2L-212ENST00000420013 BBXQ8WY36 941 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-212ENST00000420013 MAFBQ9Y5Q3 323 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-212ENST00000420013 FNDC1Q4ZHG4 1894 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-212ENST00000420013 WDR64B1ANS9 1081 aa23.09■■□□□ 1.29
MCF2L-212ENST00000420013 PSAPP07602 524 aa23.09■■□□□ 1.29
MCF2L-212ENST00000420013 BMPR1AP36894 532 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms